RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 TSSK6Q9BXA6 273 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 NRSN2Q9GZP1 204 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 TMEM27Q9HBJ8 222 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 RPS6KB2Q9UBS0 482 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 PILRBQ9UKJ0 227 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 CBLCQ9ULV8 474 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 TMEM131Q92545 1883 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 TRAPPC13A5PLN9 417 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 MPZL2O60487 215 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 OR5F1O95221 314 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 THBS1P07996 1170 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 IFI30P13284 250 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 ZNF182P17025 639 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 GSTM3P21266 225 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 S1PR1P21453 382 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 HTR2AP28223 471 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 CSNK2BP67870 215 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 RGS21Q2M5E4 152 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 ACSM5Q6NUN0 579 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 TMPRSS9Q7Z410 1059 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 C1orf210Q8IVY1 113 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 PFN4Q8NHR9 129 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 ZNF420Q8TAQ5 688 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 ATOH1Q92858 354 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 PSD2Q9BQI7 771 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 DPH1Q9BZG8 443 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 RAB33BQ9H082 229 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 KRCC1Q9NPI7 259 aaPredicted RBP9.19□□□□□ -0.94
VTA1-205ENST00000620996 MUC3AQ02505 3323 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 EML5Q05BV3 1969 aa9.19□□□□□ -0.94
VTA1-205ENST00000620996 A0A1B0GTQ1 180 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CDHR4A6H8M9 788 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 HYAL3O43820 417 aaPredicted RBP9.18□□□□□ -0.94
VTA1-205ENST00000620996 PRKYO43930 277 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SMSP52788 366 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SIGLEC14Q08ET2 396 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 DNASE1L3Q13609 305 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SLX4IPQ5VYV7 408 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 HLA-DQA1Q5Y7H0 255 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 C1orf94Q6P1W5 598 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SMARCD3Q6STE5 483 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 WDR5BQ86VZ2 330 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 KIF18BQ86Y91 864 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SLC34A3Q8N130 599 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 D2HGDHQ8N465 521 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 RAB2BQ8WUD1 216 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 Q96MT0 163 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 VSTM2LQ96N03 204 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 ZNF285Q96NJ3 590 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CTSFQ9UBX1 484 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 BLACEA4D250 179 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 BCL10O95999 233 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 THY1P04216 161 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CDK1P06493 297 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 PI4KAP42356 2102 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 GIPRP48546 466 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 ZNF136P52737 540 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 COX10Q12887 443 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 TUBA3CQ13748 450 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 GTF2IRD2BQ6EKJ0 949 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SLC27A4Q6P1M0 643 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 GTF2IRD2Q86UP8 949 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 AMER2Q8N7J2 671 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 BCORP1Q8N888 145 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 NR4A3Q92570 626 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 LRR1Q96L50 414 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CITED4Q96RK1 184 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 FUZQ9BT04 418 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 B3GNT4Q9C0J1 378 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SAP130Q9H0E3 1048 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 PRODH2Q9UF12 536 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CORINQ9Y5Q5 1042 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 IGHV3-20A0A0C4DH32 117 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 LOC100506127A0A0U1RQW1 187 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 A0A1B0GX78 115 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 FITM1A5D6W6 292 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CSTAP01040 98 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CKMT1AP12532 417 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CD36P16671 472 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CLK1P49759 484 aaKnown RBP9.18□□□□□ -0.94
VTA1-205ENST00000620996 TIGD6Q17RP2 521 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 LAPTM4BQ86VI4 370 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 P2RY8Q86VZ1 359 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CDK20Q8IZL9 346 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 OR4C6Q8NH72 309 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SAP25Q8TEE9 199 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 BORCS5Q969J3 196 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 RELTQ969Z4 430 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 SLC38A2Q96QD8 506 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 CTRCQ99895 268 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 G6PC3Q9BUM1 346 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 TEX12Q9BXU0 123 aa9.18□□□□□ -0.94
VTA1-205ENST00000620996 TP63Q9H3D4 680 aaPredicted RBP9.18□□□□□ -0.94
VTA1-205ENST00000620996 EFCAB10A6NFE3 127 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 PRKACAP17612 351 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 TMBIM6P55061 237 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms