RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OR1C1Q15619 314 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NNATQ16517 81 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PGS1Q32NB8 556 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 FAM174BQ3ZCQ3 159 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 C4orf17Q53FE4 359 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PRR30Q53SZ7 412 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 RUNDC3AQ59EK9 446 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 LRIF1Q5T3J3 769 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CPTPQ5TA50 214 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SLC25A25Q6KCM7 469 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 XKRXQ6PP77 449 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DLEU7Q6UYE1 221 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 CYP2R1Q6VVX0 501 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 Q6ZNX1 250 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 Q6ZPB1 254 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SLC29A4Q7RTT9 530 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MDGA2Q7Z553 956 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TSPYL5Q86VY4 417 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ANKRD46Q86W74 232 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GHDCQ8N2G8 530 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR2L13Q8N349 312 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TMEM156Q8N614 296 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TMCO5AQ8N6Q1 288 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ZFP62Q8NB50 900 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PIK3C3Q8NEB9 887 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR2T12Q8NG77 320 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR4N2Q8NGD1 307 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR8J2Q8NGG1 315 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OR13F1Q8NGS4 319 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PSMA8Q8TAA3 256 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SLC22A8Q8TCC7 542 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MAGEE2Q8TD90 523 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GRHL3Q8TE85 626 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SSC4DQ8WTU2 575 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 IPCEF1Q8WWN9 437 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 HOXB13Q92826 284 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 TESCQ96BS2 214 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ISOC1Q96CN7 298 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NTNG2Q96CW9 530 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MTERF3Q96E29 417 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 FAM120BQ96EK7 910 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OTUB1Q96FW1 271 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ITCHQ96J02 903 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 COX4I2Q96KJ9 171 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 RNF145Q96MT1 663 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PSMG3-AS1Q96PY0 264 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GAL3ST4Q96RP7 486 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF347Q96SE7 839 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 INPP5KQ9BT40 448 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DUSP26Q9BV47 211 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ITPAQ9BY32 194 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DPY30Q9C005 99 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 BHLHE41Q9C0J9 482 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NXF5Q9H1B4 397 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 FOLH1BQ9HBA9 442 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PROK2Q9HC23 129 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SH2D2AQ9NP31 389 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 MIEF1Q9NQG6 463 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DEPPQ9NTK1 212 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ACSS1Q9NUB1 689 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 DCAF13Q9NV06 445 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 FAIMQ9NVQ4 179 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SCN3BQ9NY72 215 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 FLRT3Q9NZU0 649 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PRODH2Q9UF12 536 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PACSIN3Q9UKS6 424 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 C19orf53Q9UNZ5 99 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 SAMD4AQ9UPU9 718 aaKnown RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ENTPD4Q9Y227 616 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 NTNG1Q9Y2I2 539 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 GPR55Q9Y2T6 319 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 KLF2Q9Y5W3 355 aaPredicted RBP4.82□□□□□ -1.64
SHMT1-211ENST00000618902 KCNE3Q9Y6H6 103 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF780BQ9Y6R6 833 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 A3GALT2U3KPV4 340 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 EXPH5Q8NEV8 1989 aa4.82□□□□□ -1.64
SHMT1-211ENST00000618902 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 A0A096LPI6 279 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 A0A1W2PRB8 838 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PRAMEF27A3QJZ7 478 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 C17orf51A8MQB3 221 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 FAM220BPB1ANY3 271 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 B4DXG7 233 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 KPNA4O00629 521 aaPredicted RBP4.81□□□□□ -1.64
SHMT1-211ENST00000618902 DLGAP1O14490 977 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 TP53I11O14683 189 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SLC22A1O15245 554 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SUSD5O60279 629 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 HCN1O60741 890 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 AGFG2O95081 481 aa4.81□□□□□ -1.64
SHMT1-211ENST00000618902 SNX4O95219 450 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms