RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	ZNF599	Q96NL3	588 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	CITED1	Q99966	193 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	RBM4B	Q9BQ04	359 aa	Known RBP	4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	TUBGCP2	Q9BSJ2	902 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	TIGAR	Q9NQ88	270 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	L3MBTL1	Q9Y468	752 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	ALG6	Q9Y672	507 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	STYXL1	Q9Y6J8	313 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087	FRMPD3	Q5JV73	1810 aa		4.37	□□□□□ -1.71
PVT1-225	ENST00000617087		A0A0J9YWU9	116 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087		A0A0U1RQS6	177 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	ZNF840P	A6NDX5	716 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	PCP4L1	A6NKN8	68 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087		G3V3Y1	287 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087		G3V4G9	280 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087		H0Y8G0	127 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	FCMR	O60667	390 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	GALR3	O60755	368 aa	Predicted RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	HOXD4	P09016	255 aa	Predicted RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	IDS	P22304	550 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	HMGCL	P35914	325 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	ELK3	P41970	407 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	CCT3	P49368	545 aa	Known RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	RPL23A	P62750	156 aa	Known RBP	4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	ST3GAL3	Q11203	375 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	CRMP1	Q14194	572 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	C14orf177	Q52M58	125 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	PAQR6	Q6TCH4	344 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	METTL7B	Q6UX53	244 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	CCDC80	Q76M96	950 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	SERPINA9	Q86WD7	417 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	ZNF440	Q8IYI8	595 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	OR2T33	Q8NG76	320 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	OR56B2P	Q8NGI1	322 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	OR5L2	Q8NGL0	311 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	OR5B2	Q96R09	309 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	KRTAP1-5	Q9BYS1	174 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	VPS33B	Q9H267	617 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	LRRN3	Q9H3W5	708 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	GLIPR2	Q9H4G4	154 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	SLC17A5	Q9NRA2	495 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	NMRK1	Q9NWW6	199 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	CTNNA3	Q9UI47	895 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	SCML2	Q9UQR0	700 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	POLDIP2	Q9Y2S7	368 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	MEMO1	Q9Y316	297 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	MOB4	Q9Y3A3	225 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	KANK1	Q14678	1352 aa		4.36	□□□□□ -1.71
PVT1-225	ENST00000617087	FAM240B	A0A1B0GVZ2	78 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	LRP5L	A4QPB2	252 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	KRTAP16-1	A8MUX0	517 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087		H3BMQ9	156 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	SAP18	O00422	153 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	N4BP1	O75113	896 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	ECI2	O75521	394 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	LRAT	O95237	230 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	VLDLR	P98155	873 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	KCNJ11	Q14654	390 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	MRGPRG-AS1	Q2M3A8	158 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	CFAP221	Q4G0U5	840 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	KCTD21	Q4G0X4	260 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	SFT2D3	Q587I9	215 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	PHYHD1	Q5SRE7	291 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	OR4F3	Q6IEY1	312 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	ZNF600	Q6ZNG1	722 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	TAS2R42	Q7RTR8	314 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	SLC47A2	Q86VL8	602 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	KRTAP7-1	Q8IUC3	87 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	TFB1M	Q8WVM0	346 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	TRUB1	Q8WWH5	349 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	ZNF689	Q96CS4	500 aa	Predicted RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	PSMB7	Q99436	277 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	VGLL1	Q99990	258 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	TRIM15	Q9C019	465 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	NXF5	Q9H1B4	397 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	PPDPF	Q9H3Y8	114 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	FANCF	Q9NPI8	374 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	DHRS4-AS1	Q9P1J3	65 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	ARMCX1	Q9P291	453 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	SAMD4A	Q9UPU9	718 aa	Known RBP	4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	PRSS21	Q9Y6M0	314 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	CECR2	Q9BXF3	1484 aa		4.35	□□□□□ -1.71
PVT1-225	ENST00000617087	RALGAPA1	Q6GYQ0	2036 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	IGHV2-70D	A0A0C4DH43	119 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	HELT	A6NFD8	242 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	ACOD1	A6NK06	481 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	CCT8L1P	A6NM43	557 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087		E9PAM4	449 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	ZNF264	O43296	627 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	KBTBD11	O94819	623 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	GJB5	O95377	273 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	SLC2A10	O95528	541 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	CD55	P08174	381 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	LAMP1	P11279	417 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	GDI1	P31150	447 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	HMGCS2	P54868	508 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	LIM2	P55344	173 aa		4.34	□□□□□ -1.71
PVT1-225	ENST00000617087	ERVPABLB-1	P60509	514 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms