RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OR2T29Q8NH02 315 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 LRTOMTQ8WZ04 291 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ALG3Q92685 438 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 PPT2Q9UMR5 302 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 ERVK-7P63135 1459 aa11.94□□□□□ -0.5
TCF4-248ENST00000616053 APC2O95996 2303 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 DNPH1O43598 174 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 NPY1RP25929 384 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 NUDT1P36639 197 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 HK3P52790 923 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 SQSTM1Q13501 440 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 OR2M3Q8NG83 312 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 RNPEPL1Q9HAU8 725 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ABHD16AO95870 558 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 MT-ND4P03905 459 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 FOXN2P32314 431 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 PTH2RP49190 550 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ACTBP60709 375 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ACTG1P63261 375 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 RPL7L1Q6DKI1 246 aaKnown RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 OR5M10Q6IEU7 315 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 LCN10Q6JVE6 187 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 TSEN2Q8NCE0 465 aaKnown RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 MDGA1Q8NFP4 955 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 UHRF1Q96T88 793 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 ONECUT1Q9UBC0 465 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 EFSO43281 561 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 METTL15P1P0C7V9 234 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 BMP1P13497 986 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ETS2P15036 469 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 GGT1P19440 569 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 PYCR1P32322 319 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 IER5LQ5T953 404 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CES4AQ5XG92 561 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 SLC27A4Q6P1M0 643 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 XKR5Q6UX68 686 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 AAED1Q7RTV5 226 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 C1orf87Q8N0U7 546 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 OR5D14Q8NGL3 314 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 BARHL1Q9BZE3 327 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 MTG2Q9H4K7 406 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CNTN6Q9UQ52 1028 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 GAAP10253 952 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 GJA4P35212 333 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 IDUAP35475 653 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 MOGSQ13724 837 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 GINS1Q14691 196 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 HACD4Q5VWC8 232 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CARM1Q86X55 608 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CLDN19Q8N6F1 224 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 DCUN1D4Q92564 292 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 MRPL15Q9P015 296 aaKnown RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 SLC6A5Q9Y345 797 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CELP19835 753 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 AMTP48728 403 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 TAS2R40P59535 323 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 TAS2R31P59538 309 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 ERV3-1Q14264 604 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 PLEKHS1Q5SXH7 462 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 LSMEM2Q8N112 164 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 OR4K13Q8NH42 304 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 NMNAT2Q9BZQ4 307 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 CCM2LQ9NUG4 571 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 EXTL2Q9UBQ6 330 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 C15orf41Q9Y2V0 281 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 MMACHCQ9Y4U1 282 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 KDELR3O43731 214 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 UBE2G1P62253 170 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 EIF4HQ15056 248 aaKnown RBP11.93□□□□□ -0.5
TCF4-248ENST00000616053 TCEAL8Q8IYN2 117 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 NEIL3Q8TAT5 605 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 IGSF21Q96ID5 467 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 PLLPQ9Y342 182 aa11.93□□□□□ -0.5
TCF4-248ENST00000616053 A0A096LPI6 279 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 IGHG1P01857 330 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ACVRL1P37023 503 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 C17orf107Q6ZR85 190 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ZNF662Q6ZS27 426 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 MUC15Q8N387 334 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 C11orf42Q8N5U0 333 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 FNDC9Q8TBE3 224 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 GIMAP2Q9UG22 337 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms