RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 OMPP47874 163 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 SNAPC1Q16533 368 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 ZCCHC12Q6PEW1 402 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 PHC2Q8IXK0 858 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 ZNF595Q8IYB9 648 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 UBALD2Q8IYN6 164 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 TMEM255BQ8WV15 326 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 SLC41A3Q96GZ6 507 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 RBM18Q96H35 190 aaKnown RBP17.71■□□□□ 0.42
MMP28-204ENST00000615136 NUAK2Q9H093 628 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 TRIM45Q9H8W5 580 aaPredicted RBP17.71■□□□□ 0.42
MMP28-204ENST00000615136 CHCHD3Q9NX63 227 aaKnown RBP17.71■□□□□ 0.42
MMP28-204ENST00000615136 CRNNQ9UBG3 495 aaPredicted RBP17.71■□□□□ 0.42
MMP28-204ENST00000615136 ZNF229Q9UJW7 825 aa17.71■□□□□ 0.42
MMP28-204ENST00000615136 CACNA1EQ15878 2313 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 IRGMA1A4Y4 181 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 PRODHO43272 600 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 NUDT21O43809 227 aaKnown RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 PRKNO60260 465 aaPredicted RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 THBS1P07996 1170 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 OR1D4P47884 311 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 ZNF267Q14586 743 aaPredicted RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 NNATQ16517 81 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 KLHL22Q53GT1 634 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 GARNL3Q5VVW2 1013 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 NPSR1Q6W5P4 371 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 ZNF730Q6ZMV8 503 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 TTLL10Q6ZVT0 673 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 C11orf74Q86VG3 221 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 GATAD2AQ86YP4 633 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 FAM83FQ8NEG4 500 aaPredicted RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 TRMT61AQ96FX7 289 aaKnown RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 CNPPD1Q9BV87 410 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 FGF20Q9NP95 211 aaPredicted RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 EXOSC4Q9NPD3 245 aaKnown RBP17.7■□□□□ 0.42
MMP28-204ENST00000615136 PCDHGB6Q9Y5F9 930 aa17.7■□□□□ 0.42
MMP28-204ENST00000615136 TMEM150CB9EJG8 249 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 PTTG1O95997 202 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 NID1P14543 1247 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 IFNA8P32881 189 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 RAB40BQ12829 278 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 TCTE1Q5JU00 501 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 SPANXN2Q5MJ10 180 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 EGFL6Q8IUX8 553 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 ZBTB8BQ8NAP8 495 aaPredicted RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 OR9Q1Q8NGQ5 310 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 PIGXQ8TBF5 258 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 VSTM2LQ96N03 204 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 SMURF1Q9HCE7 757 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 DHCR7Q9UBM7 475 aaKnown RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 SLC7A7Q9UM01 511 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 MRPS33Q9Y291 106 aaKnown RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 MN1Q10571 1320 aaPredicted RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 CDHR4A6H8M9 788 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 SNTNA6NMZ2 147 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 OR2B3O76000 313 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 DBIP07108 87 aaKnown RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 IFI6P09912 130 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 FOLR1P15328 257 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 CPEP16870 476 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 RPS19P39019 145 aaKnown RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 ETV5P41161 510 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 GPR3P46089 330 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 ETV1P50549 477 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 PGDP52209 483 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 DECR1Q16698 335 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 MINDY4Q4G0A6 757 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 WDR88Q6ZMY6 472 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 NRMQ8IXM6 262 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 OR1L3Q8NH93 324 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 ACOT11Q8WXI4 607 aaPredicted RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 SLC38A2Q96QD8 506 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 LMF2Q9BU23 707 aaKnown RBP17.69■□□□□ 0.42
MMP28-204ENST00000615136 PRRG3Q9BZD7 231 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 CHRNA10Q9GZZ6 450 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 CUTCQ9NTM9 273 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 ERVK-19Q9WJR5 959 aa17.69■□□□□ 0.42
MMP28-204ENST00000615136 TMEM129A0AVI4 362 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 KDM4EB2RXH2 506 aaPredicted RBP17.68■□□□□ 0.42
MMP28-204ENST00000615136 LOC110117498-PIK3R3F6TDL0 507 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 ADAM11O75078 769 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 OR5F1O95221 314 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 IMPDH2P12268 514 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 GLB1P16278 677 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 FPR3P25089 353 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 GTF2E2P29084 291 aaKnown RBP17.68■□□□□ 0.42
MMP28-204ENST00000615136 GPR4P46093 362 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 EFNA3P52797 238 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 SKP1P63208 163 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 GRM7Q14831 915 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 POC5Q8NA72 575 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 DGAT2Q96PD7 388 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 CD180Q99467 661 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 ELF4Q99607 663 aaPredicted RBP17.68■□□□□ 0.42
MMP28-204ENST00000615136 PRSS27Q9BQR3 290 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 NUDT22Q9BRQ3 303 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 BARHL1Q9BZE3 327 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 LANCL2Q9NS86 450 aa17.68■□□□□ 0.42
MMP28-204ENST00000615136 WDFY4Q6ZS81 3184 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 295.8 ms