RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ANKRD9Q96BM1 317 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 DIRAS2Q96HU8 199 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR51V1Q9H2C8 321 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CCDC86Q9H6F5 360 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 MEPEQ9NQ76 525 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 SIDT1Q9NXL6 827 aaKnown RBP13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 CDH10Q9Y6N8 788 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 WDFY3Q8IZQ1 3526 aa13.06□□□□□ -0.32
PCDHGA3-202ENST00000612467 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 GALR3O60755 368 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 STX11O75558 287 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR5F1O95221 314 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 LYPD3O95274 346 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 IGKV1D-16P01601 117 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 CSF2P04141 144 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL7P13232 177 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 AKT2P31751 481 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 HOXD12P35452 270 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 STAT5AP42229 794 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAZP56270 477 aaKnown RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 BNC1Q01954 994 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 KCTD7Q96MP8 289 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 GPR174Q9BXC1 333 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 NTMQ9P121 344 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 ASXL3Q9C0F0 2248 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMEM129A0AVI4 362 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 C2orf74A8MZ97 194 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 GPR75O95800 540 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 CBX7O95931 251 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 PTTG1O95997 202 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 SAGP10523 405 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 IFNA8P32881 189 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 PPM1FP49593 454 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 ARFIP1P53367 373 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 HCCSP53701 268 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 KCNJ8Q15842 424 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 QSOX2Q6ZRP7 698 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 MARCH9Q86YJ5 346 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 TOE1Q96GM8 510 aaKnown RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 TPSD1Q9BZJ3 242 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 PTGFRNQ9P2B2 879 aa13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF223Q9UK11 482 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA3-202ENST00000612467 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A1B0GVC2 190 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 A6NIN4 97 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 C12orf71A8MTZ7 269 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 E9PI62 339 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 IMPA2O14732 288 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 CASKO14936 926 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 NGFRP08138 427 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL9P15248 144 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 APEX1P27695 318 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 CASP3P42574 277 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC9A3P48764 834 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 BTG2P78543 158 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 TPBGQ13641 420 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RFLNBQ8N5W9 214 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 IL17RDQ8NFM7 739 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 ABHD8Q96I13 439 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RIPOR3Q96MK2 946 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 MRPS18AQ9NVS2 196 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 FLRT3Q9NZU0 649 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC30A4O14863 429 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 HPGDSO60760 199 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 TNFP01375 233 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 THEGLP0DJG4 465 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 NID1P14543 1247 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RCVRNP35243 200 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RPS7P62081 194 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 UBE2IP63279 158 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 P2RY14Q15391 338 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RNLSQ5VYX0 342 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 RPTNQ6XPR3 784 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 AKAP14Q86UN6 197 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 TIMP4Q99727 224 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 CACYBPQ9HB71 228 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 TNFRSF10DQ9UBN6 386 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 URADA6NGE7 173 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 CHST10O43529 356 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 ATP1B1P05026 303 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 HHEXQ03014 270 aa13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHGA3-202ENST00000612467 FZD2Q14332 565 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms