RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 CLOCKO15516 846 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 NTN1O95631 604 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 NUDT14O95848 222 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 LINGO3P0C6S8 592 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 PABPC4LP0CB38 370 aaKnown RBP21.73■■□□□ 1.07
CDKN3-211ENST00000611205 LCN1P31025 176 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 POU6F2P78424 691 aaPredicted RBP21.73■■□□□ 1.07
CDKN3-211ENST00000611205 PDE7AQ13946 482 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 ZNF239Q16600 458 aaKnown RBP21.73■■□□□ 1.07
CDKN3-211ENST00000611205 GALNTL6Q49A17 601 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 RFTN2Q52LD8 501 aaPredicted RBP21.73■■□□□ 1.07
CDKN3-211ENST00000611205 LIPMQ5VYY2 423 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 ZCCHC12Q6PEW1 402 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 PHOSPHO1Q8TCT1 267 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 RNF128Q8TEB7 428 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 FCRL1Q96LA6 429 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 ZCCHC3Q9NUD5 404 aaKnown RBP21.73■■□□□ 1.07
CDKN3-211ENST00000611205 ADAM21Q9UKJ8 722 aa21.73■■□□□ 1.07
CDKN3-211ENST00000611205 NUP214P35658 2090 aaPredicted RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 LINC00032P0C843 101 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 NEFHP12036 1026 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 EIF1P41567 113 aaKnown RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 RNF144AP50876 292 aaPredicted RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 ZNF117Q03924 483 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 VEZF1Q14119 521 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 NUFIP2Q7Z417 695 aaKnown RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 TUSC5Q8IXB3 177 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 ZNF619Q8N2I2 560 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 CDS1Q92903 461 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 CPNE4Q96A23 557 aaPredicted RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 FAM120BQ96EK7 910 aaKnown RBP21.72■■□□□ 1.07
CDKN3-211ENST00000611205 BTBD2Q9BX70 525 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 SRXN1Q9BYN0 137 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 TXLNGYQ9BZA5 131 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 TIGARQ9NQ88 270 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 GIN1Q9NXP7 522 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 RNF115Q9Y4L5 304 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 CR1P17927 2039 aa21.72■■□□□ 1.07
CDKN3-211ENST00000611205 GCM2O75603 506 aaPredicted RBP21.71■■□□□ 1.07
CDKN3-211ENST00000611205 HSPA4LO95757 839 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 CHEK2O96017 543 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 IL32P24001 234 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 CAPRIN1Q14444 709 aaKnown RBP21.71■■□□□ 1.07
CDKN3-211ENST00000611205 LASP1Q14847 261 aaKnown RBP21.71■■□□□ 1.07
CDKN3-211ENST00000611205 RNPS1Q15287 305 aaKnown RBP21.71■■□□□ 1.07
CDKN3-211ENST00000611205 CLEC12BQ2HXU8 276 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 TFAP2EQ6VUC0 442 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 GSPT2Q8IYD1 628 aaKnown RBP21.71■■□□□ 1.07
CDKN3-211ENST00000611205 MAPK1IP1LQ8NDC0 245 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 ATP6V1C2Q8NEY4 427 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 FBXO27Q8NI29 283 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 FBXW5Q969U6 566 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 RHOXF2Q9BQY4 288 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 HDHD5Q9BXW7 423 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 TUBB1Q9H4B7 451 aa21.71■■□□□ 1.07
CDKN3-211ENST00000611205 NPIPA5A0A0B4J1W7 369 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 SMIM23A6NLE4 172 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 NPIPA7E9PJI5 369 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 COPEO14579 308 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 HMGN2P05204 90 aaKnown RBP21.7■■□□□ 1.06
CDKN3-211ENST00000611205 CD3EP07766 207 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 NPIPA8P0DM63 369 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 ATP6V1C1P21283 382 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 ELK4P28324 431 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 CRHR1P34998 444 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 SFRP5Q5T4F7 317 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 LRIG3Q6UXM1 1119 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 FCRLAQ7L513 359 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 C10orf107Q8IVU9 208 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 GABRG1Q8N1C3 465 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 LILRB1Q8NHL6 650 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-211ENST00000611205 TRMT61AQ96FX7 289 aaKnown RBP21.7■■□□□ 1.06
CDKN3-211ENST00000611205 SIRT3Q9NTG7 399 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-211ENST00000611205 KLHL13Q9P2N7 655 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 TMED5Q9Y3A6 229 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 SNX8Q9Y5X2 465 aa21.7■■□□□ 1.06
CDKN3-211ENST00000611205 GJE1A6NN92 205 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 RNF223E7ERA6 249 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 ZNF195O14628 629 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 LSM1O15116 133 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 OIP5O43482 229 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 EFNA2O43921 213 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 SHBGP04278 402 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 ASMTP46597 345 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 TAB1Q15750 504 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 TMEM176BQ3YBM2 270 aaPredicted RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 EXOSC6Q5RKV6 272 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 NCMAPQ5T1S8 102 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 ADAM5Q6NVV9 412 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 CBLN3Q6UW01 205 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 R3HCC1LQ7Z5L2 792 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 MTERF4Q7Z6M4 381 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 DDIASQ8IXT1 998 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 BANPQ8N9N5 519 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 GTPBP3Q969Y2 492 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 MTERF3Q96E29 417 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 STACQ99469 402 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 PIGUQ9H490 435 aa21.69■■□□□ 1.06
CDKN3-211ENST00000611205 ESRP2Q9H6T0 727 aaKnown RBP21.69■■□□□ 1.06
CDKN3-211ENST00000611205 NGBQ9NPG2 151 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms