RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 ZNF527Q8NB42 609 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 NUP43Q8NFH3 380 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 OR2W6PQ8NHA6 318 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 RNF128Q8TEB7 428 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 ANP32BQ92688 251 aaKnown RBP14.05□□□□□ -0.16
HDDC2-210ENST00000609574 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 TNFRSF13CQ96RJ3 184 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 SHARPINQ9H0F6 387 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 RRAGDQ9NQL2 400 aaPredicted RBP14.05□□□□□ -0.16
HDDC2-210ENST00000609574 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 GDF2Q9UK05 429 aaPredicted RBP14.05□□□□□ -0.16
HDDC2-210ENST00000609574 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
HDDC2-210ENST00000609574 DPRXA6NFQ7 191 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 H3BQF6 201 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 IGKV1D-16P01601 117 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 ALOX5P09917 674 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 DDX5P17844 614 aaKnown RBP14.04□□□□□ -0.16
HDDC2-210ENST00000609574 ATP6V1C1P21283 382 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 ELK4P28324 431 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 SLC7A1P30825 629 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 HTR6P50406 440 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 PRKAA2P54646 552 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 MANFP55145 182 aaKnown RBP14.04□□□□□ -0.16
HDDC2-210ENST00000609574 TMEM176BQ3YBM2 270 aaPredicted RBP14.04□□□□□ -0.16
HDDC2-210ENST00000609574 P2RY8Q86VZ1 359 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 RELL1Q8IUW5 271 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 COX18Q8N8Q8 333 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 ATP6V1C2Q8NEY4 427 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 TMEM237Q96Q45 408 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 FUT8Q9BYC5 575 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 TMEM160Q9NX00 188 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 MGAT4BQ9UQ53 548 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 B3GALT5Q9Y2C3 310 aa14.04□□□□□ -0.16
HDDC2-210ENST00000609574 POLR3HQ9Y535 204 aaPredicted RBP14.04□□□□□ -0.16
HDDC2-210ENST00000609574 GTPBP1O00178 669 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 UBFD1O14562 309 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 ZNF195O14628 629 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 NDUFS7O75251 213 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 SEC22BO75396 215 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 KCNK2O95069 426 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 NTN1O95631 604 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 SBK3P0C264 359 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 SLC25A16P16260 332 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 PSMA4P25789 261 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 PRIM2P49643 509 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 C21orf58P58505 322 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 NAA20P61599 178 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 CKAP4Q07065 602 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 TMEM249Q2WGJ8 235 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 NOXRED1Q6NXP6 359 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 ZCCHC12Q6PEW1 402 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 KLHL17Q6TDP4 642 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 DNM1P46Q6ZS02 220 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 Q6ZT83 130 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 ZNF551Q7Z340 670 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 DTX2Q86UW9 622 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 ZNF100Q8IYN0 542 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 FBXL14Q8N1E6 418 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 TMEM151AQ8N4L1 468 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 CCNYL1Q8N7R7 359 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 PHOSPHO1Q8TCT1 267 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 JADE3Q92613 823 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 CCDC126Q96EE4 140 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 KCNA7Q96RP8 456 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 HOXD1Q9GZZ0 328 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 CDC42EP4Q9H3Q1 356 aaKnown RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 ZDHHC18Q9NUE0 388 aa14.03□□□□□ -0.16
HDDC2-210ENST00000609574 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-210ENST00000609574 IGHV4-30-2A0A087WSY4 118 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 A0A087WUV0 522 aaPredicted RBP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 A0A1W2PQD3 144 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 KIF2AO00139 706 aaPredicted RBP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 ABCD4O14678 606 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 GPRIN2O60269 458 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 RAMP1O60894 148 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 CD8AP01732 235 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 GGT1P19440 569 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 CASP9P55211 416 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 LOXL1Q08397 574 aaPredicted RBP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 CFAP157Q5JU67 520 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 TIMM23BQ5SRD1 257 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 SLC22A25Q6T423 547 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 TMEM108Q6UXF1 575 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 OR10H5Q8NGA6 315 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 FBXO27Q8NI29 283 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 POC1BQ8TC44 478 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 DCAKDQ8WVC6 231 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 L3HYPDHQ96EM0 354 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 METTL2AQ96IZ6 378 aaKnown RBP14.02□□□□□ -0.17
HDDC2-210ENST00000609574 MS4A4EQ96PG1 132 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 CACNG6Q9BXT2 260 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 CBLN4Q9NTU7 201 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 TMEM216Q9P0N5 145 aa14.02□□□□□ -0.17
HDDC2-210ENST00000609574 SH3BP4Q9P0V3 963 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms