RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 GPC1P35052 558 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ACVR1BP36896 505 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 HSD17B3P37058 310 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 RPL3P39023 403 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 MAGEA12P43365 314 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 RFX3P48380 749 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 GZMKP49863 264 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 CASP9P55211 416 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 TPD52P55327 224 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 RAC3P60763 192 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 GUCY2DQ02846 1103 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 BSPH1Q075Z2 132 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 C2orf80Q0P641 193 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 SCGB2A2Q13296 93 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 SQLEQ14534 574 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 PPA1Q15181 289 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 TAB1Q15750 504 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ZNF239Q16600 458 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 CTU2Q2VPK5 515 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 TMEM249Q2WGJ8 235 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ELOA3BQ3SY89 546 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 GLE1Q53GS7 698 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 ARL13AQ5H913 290 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 TIMM23BQ5SRD1 257 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 CYB5R2Q6BCY4 276 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ZNF544Q6NX49 715 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 LETMD1Q6P1Q0 360 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 UGT2A3Q6UWM9 527 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 TMEM107Q6UX40 140 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 TFAP2EQ6VUC0 442 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 FCRLAQ7L513 359 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 BHLHA15Q7RTS1 189 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 RELL1Q8IUW5 271 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 CTAGE4Q8IX94 777 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 LILRA2Q8N149 483 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 FBXL14Q8N1E6 418 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ZNF540Q8NDQ6 660 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ELOA3Q8NG57 546 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 OR4N2Q8NGD1 307 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 GPR151Q8TDV0 419 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 DCAKDQ8WVC6 231 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 PROX1Q92786 737 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 RNF166Q96A37 237 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 ELP4Q96EB1 424 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 RNF145Q96MT1 663 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 AMDHD1Q96NU7 426 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 NSUN5Q96P11 429 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 CITED4Q96RK1 184 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 FUT8Q9BYC5 575 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 TRIM2Q9C040 744 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 C12orf49Q9H741 205 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 FARSBQ9NSD9 589 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 MED17Q9NVC6 651 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ARGLU1Q9NWB6 273 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 EMC3Q9P0I2 261 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 DMGDHQ9UI17 866 aaKnown RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 CLEC4AQ9UMR7 237 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 ZNF232Q9UNY5 417 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 MAGED1Q9Y5V3 778 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 ACTL7BQ9Y614 415 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 SPIN1Q9Y657 262 aaPredicted RBP5.6□□□□□ -1.51
CUX1-220ENST00000607092 PMF1-BGLAPU3KQ54 211 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 MEGF8Q7Z7M0 2845 aa5.6□□□□□ -1.51
CUX1-220ENST00000607092 GOLGA8QA0A0J9YX86 632 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 HMX2A2RU54 273 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GOLGA8OA6NCC3 632 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GOLGA8NF8WBI6 632 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 H7C417 338 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GOLGA8RI6L899 631 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GPR171O14626 319 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 TNFSF11O14788 317 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 PDPK1O15530 556 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 RGS14O43566 566 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 RRP9O43818 475 aaKnown RBP5.59□□□□□ -1.51
CUX1-220ENST00000607092 SSX4O60224 188 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 ADAM11O75078 769 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GCM2O75603 506 aaPredicted RBP5.59□□□□□ -1.51
CUX1-220ENST00000607092 RSL1D1O76021 490 aaKnown RBP5.59□□□□□ -1.51
CUX1-220ENST00000607092 NUDT14O95848 222 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 ALOX5P09917 674 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 DHRS4L1P0CG22 281 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 NID1P14543 1247 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 SRD5A1P18405 259 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 GGT1P19440 569 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 IMPDH1P20839 514 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 PCMT1P22061 227 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 TTKP33981 857 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 CDKN1AP38936 164 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 OR3A2P47893 321 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 SLC6A8P48029 635 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 PRIM2P49643 509 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 MANFP55145 182 aaKnown RBP5.59□□□□□ -1.51
CUX1-220ENST00000607092 CDH11P55287 796 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 CDH13P55290 713 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 CSNK2A1P68400 391 aaPredicted RBP5.59□□□□□ -1.51
CUX1-220ENST00000607092 DUSP2Q05923 314 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 SLC18A2Q05940 514 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 ZNF844Q08AG5 666 aa5.59□□□□□ -1.51
CUX1-220ENST00000607092 FAPQ12884 760 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms