RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 CCDC160A6NGH7 325 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 FAM20BO75063 409 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 ALDH3B2P48448 385 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PMS2P3Q13401 168 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 KIF18BQ86Y91 864 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 DEPDC4Q8N2C3 294 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 B3GNT7Q8NFL0 401 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 IL4I1Q96RQ9 567 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PLA2G12AQ9BZM1 189 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 SCN3BQ9NY72 215 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 ERVK-18Q9QC07 812 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PMS2P1A4D2B8 440 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 C4orf47A7E2U8 309 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 NUDT6P53370 316 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 DCAF7P61962 342 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 RNF4P78317 190 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 CD226Q15762 336 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PAPD4Q6PIY7 484 aaKnown RBP17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 CD300LDQ6UXZ3 194 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 SPARTQ8N0X7 666 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 SUMF1Q8NBK3 374 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 APCDD1LQ8NCL9 501 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PFN4Q8NHR9 129 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 PHOSPHO1Q8TCT1 267 aa17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 GPN3Q9UHW5 284 aaPredicted RBP17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 ZNF223Q9UK11 482 aaPredicted RBP17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 MRTO4Q9UKD2 239 aaKnown RBP17.65■□□□□ 0.42
TUBB4B-202ENST00000604929 A0A1B0GWA3 101 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 SCDO00767 359 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 FMO6PO60774 539 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CBFA2T3O75081 653 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ICOSLGO75144 302 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 LYPD3O95274 346 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 IL12BP29460 328 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ETV5P41161 510 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CXCR4P61073 352 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 TSPAN31Q12999 210 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CPEB2Q7Z5Q1 589 aaKnown RBP17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GALNT6Q8NCL4 622 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 NFAM1Q8NET5 270 aaPredicted RBP17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 TMEM239Q8WW34 195 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF566Q969W8 418 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 NODALQ96S42 347 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 SLC26A1Q9H2B4 701 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ZBTB20Q9HC78 741 aaPredicted RBP17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 C20orf141Q9NUB4 165 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 TPRKBQ9Y3C4 175 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 SAGE2PA6NJ88 616 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GNB5O14775 395 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GMFGO60234 142 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GABRB1P18505 474 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 FUT1P19526 365 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GSTM3P21266 225 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ABCD3P28288 659 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CCKBRP32239 447 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GIPRP48546 466 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 PLCXD2Q0VAA5 305 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 GINS1Q14691 196 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CBLN3Q6UW01 205 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 HSDL2Q6YN16 418 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF550Q7Z398 422 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF527Q8NB42 609 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 LPAR4Q99677 370 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 WDR77Q9BQA1 342 aaPredicted RBP17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 RTN4RQ9BZR6 473 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 HOXD1Q9GZZ0 328 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 ATP13A2Q9NQ11 1180 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 TVP23BQ9NYZ1 205 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 AKAP7Q9P0M2 348 aaPredicted RBP17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 IL20RAQ9UHF4 553 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 CARD8Q9Y2G2 431 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 LOXL2Q9Y4K0 774 aa17.64■□□□□ 0.41
TUBB4B-202ENST00000604929 HEATR5AQ86XA9 2040 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 A0A0B4J2E0 115 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 SMIM31A0A1B0GVY4 71 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 A0A1B0GX12 115 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 CDC42EP2O14613 210 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 GABARAPL2P60520 117 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 INSM1Q01101 510 aaPredicted RBP17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 ALG10BQ5I7T1 473 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 CLEC12AQ5QGZ9 265 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 ACSM5Q6NUN0 579 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF613Q6PF04 617 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 TOR1AIP2Q8NFQ8 470 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 OMA1Q96E52 524 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 ZNF318Q5VUA4 2279 aa17.63■□□□□ 0.41
TUBB4B-202ENST00000604929 OR6C76A6NM76 312 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 C17orf51A8MQB3 221 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 GTPBP1O00178 669 aaKnown RBP17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 OIP5O43482 229 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 CCR4P51679 360 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SLC35A2P78381 396 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 SLX4IPQ5VYV7 408 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 CASP12Q6UXS9 341 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 AHSA2Q719I0 299 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 CMIPQ8IY22 773 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 OR5M3Q8NGP4 307 aa17.62■□□□□ 0.41
TUBB4B-202ENST00000604929 DPH1Q9BZG8 443 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms