RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	KCNK2	O95069	426 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	NGFR	P08138	427 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	VIM	P08670	466 aa	Known RBP	13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	UROS	P10746	265 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	AGTR1	P30556	359 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	GPC1	P35052	558 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	PRKAG1	P54619	331 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	DNAJB13	P59910	316 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	RPL38	P63173	70 aa	Known RBP	13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	BEX5	Q5H9J7	111 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223		Q6ZSR9	355 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CPLX4	Q7Z7G2	160 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	FAM110B	Q8TC76	370 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	LRRC8C	Q8TDW0	803 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CKAP2	Q8WWK9	683 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	PPCDC	Q96CD2	204 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CCDC126	Q96EE4	140 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CHMP6	Q96FZ7	201 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	MAGEB18	Q96M61	343 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	MDFI	Q99750	246 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	ACTR6	Q9GZN1	396 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CCDC134	Q9H6E4	229 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	C1orf109	Q9NX04	203 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	NTM	Q9P121	344 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	BAIAP2L1	Q9UHR4	511 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	FIS1	Q9Y3D6	152 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	FBN1	P35555	2871 aa	Known RBP	13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	CUBN	O60494	3623 aa		13.11	□□□□□ -0.31
IRF3-223	ENST00000599223	ATR	Q13535	2644 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	FAM171A2	A8MVW0	826 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	TMEM233	B4DJY2	109 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	CNOT4	O95628	575 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	PLG	P00747	810 aa	Predicted RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	PRIM2	P49643	509 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	KRTAP1-1	Q07627	177 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	FOXF1	Q12946	379 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	CAPRIN1	Q14444	709 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	CCDC153	Q494R4	210 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	RFTN2	Q52LD8	501 aa	Predicted RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	CFAP157	Q5JU67	520 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	ATG4D	Q86TL0	474 aa	Predicted RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	WFDC8	Q8IUA0	241 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	WDR75	Q8IWA0	830 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	CDRT4	Q8N9R6	151 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	NUP43	Q8NFH3	380 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	OR2V1	Q8NHB1	315 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	ABHD3	Q8WU67	409 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	ZNF524	Q96C55	264 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	PLPPR2	Q96GM1	343 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	TMEM204	Q9BSN7	226 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	BDH2	Q9BUT1	245 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	SRXN1	Q9BYN0	137 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	PRRG4	Q9BZD6	226 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	REEP4	Q9H6H4	257 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	C12orf49	Q9H741	205 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	C3orf14	Q9HBI5	128 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	OXSM	Q9NWU1	459 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	GIMAP2	Q9UG22	337 aa		13.1	□□□□□ -0.31
IRF3-223	ENST00000599223	MCTS1	Q9ULC4	181 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-223	ENST00000599223		A0A087WZY1	265 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	NPIPA5	A0A0B4J1W7	369 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	TTC36	A6NLP5	189 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	NPIPA7	E9PJI5	369 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	NDUFAB1	O14561	156 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	LSM1	O15116	133 aa	Known RBP	13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	TBX19	O60806	448 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	NTN1	O95631	604 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	LINGO3	P0C6S8	592 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	NPIPA8	P0DM63	369 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	PAX1	P15863	534 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	CTBP2	P56545	445 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	MPP2	Q14168	576 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	PCLAF	Q15004	111 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	TSC22D1	Q15714	1073 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	KANK2	Q63ZY3	851 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	HBM	Q6B0K9	141 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ESPNL	Q6ZVH7	1005 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	PLEKHM3	Q6ZWE6	761 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	C10orf107	Q8IVU9	208 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	RAB3IL1	Q8TBN0	382 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	BCAS4	Q8TDM0	211 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	RNF128	Q8TEB7	428 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ROBO4	Q8WZ75	1007 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ZBTB8A	Q96BR9	441 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	FAM120B	Q96EK7	910 aa	Known RBP	13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ZNF701	Q9NV72	531 aa	Predicted RBP	13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	SH3BP4	Q9P0V3	963 aa		13.09	□□□□□ -0.31
IRF3-223	ENST00000599223	CHD3	Q12873	2000 aa	Known RBP	13.08	□□□□□ -0.31
IRF3-223	ENST00000599223	COL6A5	A8TX70	2615 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	HS3ST1	O14792	307 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	AZIN1	O14977	448 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	BIRC5	O15392	142 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	EFNA2	O43921	213 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	GCM2	O75603	506 aa	Predicted RBP	13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	CHRNG	P07510	517 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	LINC00032	P0C843	101 aa		13.08	□□□□□ -0.32
IRF3-223	ENST00000599223	CPA3	P15088	417 aa		13.08	□□□□□ -0.32

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