RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 NDRG3Q9UGV2 375 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 CARD8Q9Y2G2 431 aa13.54□□□□□ -0.24
LIG1-215ENST00000597901 A0A0J9YW62 118 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 H3BNH8 94 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 CASKO14936 926 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 EFNA2O43921 213 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 SOAT1P35610 550 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 EIF1P41567 113 aaKnown RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 SLC6A8P48029 635 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 PCYT1AP49585 367 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 ART1P52961 327 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 SIRPAP78324 504 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 ZNF117Q03924 483 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 CTU2Q2VPK5 515 aaKnown RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIG1-215ENST00000597901 ANXA8L1Q5VT79 327 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 VPS37AQ8NEZ2 397 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 OR4A15Q8NGL6 344 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 OR10D3Q8NH80 312 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 TESCQ96BS2 214 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 ADGRG7Q96K78 797 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 SERHL2Q9H4I8 314 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 CCM2LQ9NUG4 571 aaPredicted RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 PAQR5Q9NXK6 330 aaPredicted RBP13.53□□□□□ -0.24
LIG1-215ENST00000597901 ST6GALNAC2Q9UJ37 374 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 ICAM5Q9UMF0 924 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 DTNAQ9Y4J8 743 aa13.53□□□□□ -0.24
LIG1-215ENST00000597901 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 SH3D21A4FU49 640 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CXCL13O43927 109 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 FCMRO60667 390 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CD8BP10966 210 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 IL11P20809 199 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 UQCRC2P22695 453 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CPOXP36551 454 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CD79BP40259 229 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 P2RX1P51575 399 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 SLC18A1P54219 525 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CARD18P57730 90 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 FGFBP1Q14512 234 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CASP8Q14790 479 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 GUSBP1Q15486 140 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 ARHGAP11BQ3KRB8 267 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 ESPNLQ6ZVH7 1005 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 FAM214BQ7L5A3 538 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 CHDHQ8NE62 594 aaPredicted RBP13.52□□□□□ -0.25
LIG1-215ENST00000597901 OR2V1Q8NHB1 315 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 FBXO27Q8NI29 283 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 GPR119Q8TDV5 335 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 OSTF1Q92882 214 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 NINJ1Q92982 152 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 WFIKKN1Q96NZ8 548 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 TMEM185BQ9H7F4 350 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 PLSCR4Q9NRQ2 329 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 THAP1Q9NVV9 213 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 ELOVL5Q9NYP7 299 aa13.52□□□□□ -0.25
LIG1-215ENST00000597901 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 SDHDO14521 159 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 ZNF195O14628 629 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 TNFSF11O14788 317 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 EIF4E2O60573 245 aaKnown RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 SNNO75324 88 aaPredicted RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 SYNGR4O95473 234 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 NUDT14O95848 222 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 FCGR2AP12318 317 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 ME2P23368 584 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 ADH6P28332 368 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 S100A3P33764 101 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 CASP9P55211 416 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 UFM1P61960 85 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 GPR68Q15743 365 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 TOMM34Q15785 309 aaPredicted RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 NDUFAF6Q330K2 333 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 SPANXN4Q5MJ08 99 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 BEND6Q5SZJ8 279 aaPredicted RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 HBMQ6B0K9 141 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 OGFOD2Q6N063 350 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 PPP4R4Q6NUP7 873 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 OLIG3Q7RTU3 272 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 MGARPQ8TDB4 240 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 ZNF524Q96C55 264 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 SLC35G5Q96KT7 338 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 TEX37Q96LM6 180 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 FOXC2Q99958 501 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 NMUR2Q9GZQ4 415 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 OR51I1Q9H343 314 aa13.51□□□□□ -0.25
LIG1-215ENST00000597901 WDR55Q9H6Y2 383 aaPredicted RBP13.51□□□□□ -0.25
LIG1-215ENST00000597901 TMBIM4Q9HC24 238 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms