RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GIN1Q9NXP7 522 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 FLNAP21333 2647 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 NAV3Q8IVL0 2385 aa15.82■□□□□ 0.12
SHKBP1-203ENST00000594298 DEFB108AA8MXU0 73 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 SLC22A3O75751 556 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 MPDZO75970 2070 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 CPSF4O95639 269 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 LCN1P31025 176 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 SOAT1P35610 550 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 CD79BP40259 229 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 HBA1P69905 142 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 LASP1Q14847 261 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 FAM174BQ3ZCQ3 159 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 SPANXN4Q5MJ08 99 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 OR5M10Q6IEU7 315 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 CDC73Q6P1J9 531 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 CHMP1BQ7LBR1 199 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 MAVSQ7Z434 540 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 P4HA3Q7Z4N8 544 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 COX18Q8N8Q8 333 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 FADS6Q8N9I5 356 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 OR4A15Q8NGL6 344 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 C16orf58Q96GQ5 468 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 WFIKKN1Q96NZ8 548 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 OR52B2Q96RD2 323 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 CCDC28BQ9BUN5 200 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 PIGUQ9H490 435 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 TCF7L2Q9NQB0 619 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 DUSP22Q9NRW4 184 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 ZNF226Q9NYT6 803 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 ZIM2Q9NZV7 527 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 C6orf203Q9P0P8 240 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 ABCG2Q9UNQ0 655 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 DNHD1Q96M86 4753 aa15.81■□□□□ 0.12
SHKBP1-203ENST00000594298 SLC22A20A6NK97 555 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 DUXAA6NLW8 204 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 SIAH2O43255 324 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 IL6P05231 212 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 ACP2P11117 423 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 PEPDP12955 493 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 UQCRC2P22695 453 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 CRYGSP22914 178 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 RFX3P48380 749 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 AQP5P55064 265 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 EEFSECP57772 596 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 STX1BP61266 288 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 IRX1P78414 480 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 POU6F2P78424 691 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 PRSS57Q6UWY2 283 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 Q71RC1 249 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 CLECL1Q8IZS7 167 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 MIER2Q8N344 545 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 TRIML2Q8N7C3 387 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 SLC16A11Q8NCK7 471 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 OR4K17Q8NGC6 315 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 PIK3R3Q92569 461 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 COX4I2Q96KJ9 171 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 BTBD2Q9BX70 525 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 BTNL2Q9UIR0 455 aa15.8■□□□□ 0.12
SHKBP1-203ENST00000594298 GXYLT2A0PJZ3 443 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 LINC01387J3KSC0 135 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 SMPD2O60906 423 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 SCN2BO60939 215 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 TNFRSF21O75509 655 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 SMNDC1O75940 238 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 PGRP06401 933 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 FPR1P21462 350 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 EVI2BP34910 448 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 KIR2DL2P43627 348 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 IDH3AP50213 366 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 CLDN15P56746 228 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 GANABQ14697 944 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 DUSP5Q16690 384 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 Q5PR19 223 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 VWA1Q6PCB0 445 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 ZNF474Q6S9Z5 364 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 C6orf120Q7Z4R8 191 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 BTLAQ7Z6A9 289 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 P3H2Q8IVL5 708 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 MEIOBQ8N635 442 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 CNEP1R1Q8N9A8 125 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 OR2M3Q8NG83 312 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 FBXO30Q8TB52 745 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 FAM110BQ8TC76 370 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 CCDC115Q96NT0 180 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 OR52E6Q96RD3 313 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 SIKE1Q9BRV8 207 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 TBL1XR1Q9BZK7 514 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 SDR39U1Q9NRG7 319 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 KLHL28Q9NXS3 571 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 PPP4R1LQ9P1A2 415 aa15.79■□□□□ 0.12
SHKBP1-203ENST00000594298 MED12Q93074 2177 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 RNF103-CHMP3A0A140T963 221 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 FADS1O60427 444 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 KCNK2O95069 426 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 UTS2O95399 124 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 AGR2O95994 175 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 CGAP01215 116 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms