RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 GIMAP2Q9UG22 337 aa17.05■□□□□ 0.32
SIN3B-203ENST00000594235 TRAF6Q9Y4K3 522 aa17.05■□□□□ 0.32
SIN3B-203ENST00000594235 HIVEP2P31629 2446 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 TRIM64A6NGJ6 449 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 TRIM64BA6NI03 449 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 HSPA4LO95757 839 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 LAMP1P11279 417 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 AGTR1P30556 359 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 HPCAL1P37235 193 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 ZNF117Q03924 483 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 FOXF1Q12946 379 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 XKR7Q5GH72 579 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 LRIG3Q6UXM1 1119 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 ZNF704Q6ZNC4 412 aaPredicted RBP17.04■□□□□ 0.32
SIN3B-203ENST00000594235 BEND4Q6ZU67 534 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 LILRA2Q8N149 483 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 OR7A2PQ8NGA2 310 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 OSTF1Q92882 214 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 MECRQ9BV79 373 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 ACTR6Q9GZN1 396 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 PIGUQ9H490 435 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 HEATR5AQ86XA9 2040 aa17.04■□□□□ 0.32
SIN3B-203ENST00000594235 TMEM114B3SHH9 223 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 OIP5O43482 229 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 EFNA2O43921 213 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 NPHS1O60500 1241 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 PLAUP00749 431 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 TUBBP07437 444 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 PSMB1P20618 241 aaKnown RBP17.03■□□□□ 0.32
SIN3B-203ENST00000594235 EIF1P41567 113 aaKnown RBP17.03■□□□□ 0.32
SIN3B-203ENST00000594235 PTH2RP49190 550 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 CARD18P57730 90 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 ZNF239Q16600 458 aaKnown RBP17.03■□□□□ 0.32
SIN3B-203ENST00000594235 KLHL26Q53HC5 615 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 CDC73Q6P1J9 531 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 CBLN3Q6UW01 205 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 PLEKHM3Q6ZWE6 761 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 BANPQ8N9N5 519 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 PSMA8Q8TAA3 256 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 RNF128Q8TEB7 428 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 ABHD3Q8WU67 409 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 ROBO4Q8WZ75 1007 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 TMEM204Q9BSN7 226 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 BDH2Q9BUT1 245 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 C12orf49Q9H741 205 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 GIN1Q9NXP7 522 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 GPR52Q9Y2T5 361 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 SNX8Q9Y5X2 465 aa17.03■□□□□ 0.32
SIN3B-203ENST00000594235 NPIPA5A0A0B4J1W7 369 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 NPIPA7E9PJI5 369 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 NPIPA8P0DM63 369 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PAX1P15863 534 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 DDX5P17844 614 aaKnown RBP17.02■□□□□ 0.32
SIN3B-203ENST00000594235 ELK4P28324 431 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 SFTPDP35247 375 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 RNF144AP50876 292 aaPredicted RBP17.02■□□□□ 0.32
SIN3B-203ENST00000594235 NR1H2P55055 460 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 ZNF844Q08AG5 666 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PTGR1Q14914 329 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PDSS1Q5T2R2 415 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 MTERF4Q7Z6M4 381 aaKnown RBP17.02■□□□□ 0.32
SIN3B-203ENST00000594235 STK32CQ86UX6 486 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 WFDC8Q8IUA0 241 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 HOMEZQ8IX15 550 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PHOSPHO1Q8TCT1 267 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 AGR3Q8TD06 166 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 NUDT8Q8WV74 236 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 CHMP6Q96FZ7 201 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PLPPR2Q96GM1 343 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 PPP3R2Q96LZ3 170 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 C3orf30Q96M34 536 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 SRXN1Q9BYN0 137 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 CXorf36Q9H7Y0 433 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 FANCFQ9NPI8 374 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 GPATCH2Q9NW75 528 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 SLC17A7Q9P2U7 560 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 ICAM5Q9UMF0 924 aa17.02■□□□□ 0.32
SIN3B-203ENST00000594235 SMAD7O15105 426 aaKnown RBP17.01■□□□□ 0.31
SIN3B-203ENST00000594235 PEX11AO75192 247 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ATP6V1C1P21283 382 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ADH6P28332 368 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 MAPK1P28482 360 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ARRB2P32121 409 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 RPL3P39023 403 aaKnown RBP17.01■□□□□ 0.31
SIN3B-203ENST00000594235 CCT3P49368 545 aaKnown RBP17.01■□□□□ 0.31
SIN3B-203ENST00000594235 GTF2IRD2BQ6EKJ0 949 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 TFAP2EQ6VUC0 442 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 GTF2IRD2Q86UP8 949 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 OR2W6PQ8NHA6 318 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 OR5P2Q8WZ92 322 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ACTRT3Q9BYD9 372 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 EML4Q9HC35 981 aaKnown RBP17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ZNF701Q9NV72 531 aaPredicted RBP17.01■□□□□ 0.31
SIN3B-203ENST00000594235 ACTL7BQ9Y614 415 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 KCNE3Q9Y6H6 103 aa17.01■□□□□ 0.31
SIN3B-203ENST00000594235 TLDC2A0PJX2 215 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms