RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ANGPTL3Q9Y5C1 460 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 KLF2Q9Y5W3 355 aaPredicted RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 PKDREJQ9NTG1 2253 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 A0A1B0GTH9 108 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 ARHGAP10A1A4S6 786 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SYNDIG1LA6NDD5 238 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 GAGE10A6NGK3 116 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 AGAP5A6NIR3 686 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 GLOD5A6NK44 160 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TRIM49D1C9J1S8 452 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 POC1B-GALNT4F8VUJ3 575 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 G3V3Y1 287 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 FOXE1O00358 373 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 TSPAN4O14817 238 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TMCC2O75069 709 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SPDEFO95238 335 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 CLDN9O95484 217 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 NADKO95544 446 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 MLYCDO95822 493 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 GBAP04062 536 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 CLPSP04118 112 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 FESP07332 822 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 INHBAP08476 426 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 RPS17P08708 135 aaKnown RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 RBP1P09455 135 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 CTAGE8P0CG41 777 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SERPINB9P50453 376 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 RAP1GDS1P52306 607 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 ZNF630Q2M218 657 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 PIGGQ5H8A4 983 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 FAM205BPQ63HN1 556 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 METTL2BQ6P1Q9 378 aaKnown RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 KLC3Q6P597 504 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 CTAGE4Q8IX94 777 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 C9orf40Q8IXQ3 194 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 GPALPP1Q8IXQ4 340 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SLC34A3Q8N130 599 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 POGLUT1Q8NBL1 392 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 OR2M7Q8NG81 312 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 AGAP11Q8TF27 550 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TANKQ92844 425 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TRMT61AQ96FX7 289 aaKnown RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 PRR25Q96S07 402 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 NTMT1Q9BV86 223 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 BEX4Q9NWD9 120 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 HPF1Q9NWY4 346 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TEX10Q9NXF1 929 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 MS4A12Q9NXJ0 267 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 TAS2R10Q9NYW0 307 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SLC25A10Q9UBX3 287 aaPredicted RBP6.87□□□□□ -1.31
VMP1-213ENST00000591877 PHF11Q9UIL8 331 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 ZNF225Q9UK10 706 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 ERVK-11Q9UQG0 969 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 SPACA6W5XKT8 324 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 CREBBPQ92793 2442 aa6.87□□□□□ -1.31
VMP1-213ENST00000591877 ARHGAP21Q5T5U3 1957 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 A0A087WUV0 522 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 A8MT66 165 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 FAM166BA8MTA8 275 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 TFECO14948 347 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 PGRMC2O15173 223 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 CDC40O60508 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
VMP1-213ENST00000591877 PDE9AO76083 593 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 GLSO94925 669 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 GPR75O95800 540 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 AIFM1O95831 613 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 CLEC3BP05452 202 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 TMIGD3P0DMS9 266 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 CCL3P10147 92 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 ABOP16442 354 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 TSPAN8P19075 237 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 CNR1P21554 472 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 DUSP1P28562 367 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 HTR1EP28566 365 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 PTGS2P35354 604 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 DNASE1L1P49184 302 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 CCNG1P51959 295 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 SLC37A1P57057 533 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 ASPHQ12797 758 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 FHL2Q14192 279 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 ZNF791Q3KP31 576 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 FAM153CQ494X1 144 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 MTFR2Q6P444 385 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 XKRXQ6PP77 449 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 RTL4Q6ZR62 310 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 NUDT13Q86X67 352 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 ST13P4Q8IZP2 240 aaPredicted RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 RPRMLQ8N4K4 120 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 MARVELD2Q8N4S9 558 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 OR4F6Q8NGB9 312 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 OR5L2Q8NGL0 311 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 NUBPLQ8TB37 319 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 FAM57AQ8TBR7 257 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 PHF10Q8WUB8 498 aaKnown RBP6.86□□□□□ -1.31
VMP1-213ENST00000591877 XAGE5Q8WWM1 108 aa6.86□□□□□ -1.31
VMP1-213ENST00000591877 REPS1Q96D71 796 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms