RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 C21orf59P57076 290 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZNF45Q02386 682 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SLC3A1Q07837 685 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ACSM1Q08AH1 577 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 LCP2Q13094 533 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SRSF5Q13243 272 aaKnown RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 GPR17Q13304 367 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TRA2AQ13595 282 aaKnown RBP eCLIP3.1□□□□□ -1.91
VMP1-212ENST00000591782 ALCAMQ13740 583 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 P2RY6Q15077 328 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PDK2Q15119 407 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 GUK1Q16774 197 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NDUFAF6Q330K2 333 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM30BQ3MIR4 351 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 GTDC1Q4AE62 458 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NADK2Q4G0N4 442 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 HSD17B12Q53GQ0 312 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 C9orf152Q5JTZ5 239 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CDKL4Q5MAI5 379 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SPANXN2Q5MJ10 180 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 RABGAP1LQ5R372 815 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PPM1LQ5SGD2 360 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 BEND3Q5T5X7 828 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 FAM46CQ5VWP2 391 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 LRRC66Q68CR7 880 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 KRT39Q6A163 491 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PRR5LQ6MZQ0 368 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ADAM5Q6NVV9 412 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TTC27Q6P3X3 843 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 FAM199XQ6PEV8 388 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM270Q6UE05 265 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 GSG1LQ6UXU4 331 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 OTOAQ7RTW8 1153 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SLC16A9Q7RTY1 509 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TRMT11Q7Z4G4 463 aaKnown RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 SNX20Q7Z614 316 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 GLRX5Q86SX6 157 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CROCCP2Q86T23 111 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMPRSS11BQ86T26 416 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 RALGPS2Q86X27 583 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 DHFR2Q86XF0 187 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 KLHL7Q8IXQ5 586 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CDK20Q8IZL9 346 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 THEM5Q8N1Q8 247 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 METTL4Q8N3J2 472 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZNF561Q8N587 486 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 MAPKAPK5-AS1Q8N8E1 139 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM35BQ8NCS4 154 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 FBXL13Q8NEE6 735 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 Q8NFD4 153 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 KBTBD8Q8NFY9 601 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 OR11H4Q8NGC9 324 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 OR2D3Q8NGH3 330 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 OR2T34Q8NGX1 318 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 OR2T3Q8NH03 318 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 FIBINQ8TAL6 211 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NDNFQ8TB73 568 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TCP10LQ8TDR4 215 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CCDC107Q8WV48 283 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SSMEM1Q8WWF3 244 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM190Q8WZ59 177 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 P2RX5Q93086 422 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 SGTBQ96EQ0 304 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PGAP3Q96FM1 320 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZNF486Q96H40 463 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 LRR1Q96L50 414 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 LINC00615Q96LM1 132 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 RNF145Q96MT1 663 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZNF317Q96PQ6 595 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 SEPHS2Q99611 448 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CHP1Q99653 195 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PELOQ9BRX2 385 aaKnown RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 TSSK1BQ9BXA7 367 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TRIM9Q9C026 710 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 TMEM117Q9H0C3 514 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 RAB17Q9H0T7 212 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 DCLRE1BQ9H816 532 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ANKZF1Q9H8Y5 726 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CYP3A43Q9HB55 503 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 IFT46Q9NQC8 304 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NANSQ9NR45 359 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZNF275Q9NSD4 429 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 ZCCHC3Q9NUD5 404 aaKnown RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 IMPAD1Q9NX62 359 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 LRWD1Q9UFC0 647 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CLEC2DQ9UHP7 191 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ERRFI1Q9UJM3 462 aaPredicted RBP3.1□□□□□ -1.91
VMP1-212ENST00000591782 C3orf18Q9UK00 162 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 BAIAP2Q9UQB8 552 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 PADI2Q9Y2J8 665 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 MFHAS1Q9Y4C4 1052 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NPHP3Q7Z494 1330 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 ADGRA3Q8IWK6 1321 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 IGSF1Q8N6C5 1336 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 CFAP43Q8NDM7 1665 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 RFX7Q2KHR2 1363 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 NCOA1Q15788 1441 aa3.1□□□□□ -1.91
VMP1-212ENST00000591782 AQRO60306 1485 aaKnown RBP eCLIP3.09□□□□□ -1.917e-21■■■■□ 23.2
VMP1-212ENST00000591782 RAPGEF2Q9Y4G8 1499 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms