RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 C17orf51A8MQB3 221 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 SYT5O00445 386 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 SNPHO15079 494 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 HCRTR2O43614 444 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 EIF4E2O60573 245 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 BCAS1O75363 584 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 CYP7B1O75881 506 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 FESP07332 822 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 C8BP07358 591 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 NQO1P15559 274 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 ELAVL4P26378 380 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 MEOX1P50221 254 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF117Q03924 483 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 SKP2Q13309 424 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 INPP5JQ15735 1006 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 NDUFAF6Q330K2 333 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 SLC6A19Q695T7 634 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 TIGD3Q6B0B8 471 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 OR5M10Q6IEU7 315 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 PLCZ1Q86YW0 608 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 GRAMD2AQ8IUY3 354 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 TMCO5AQ8N6Q1 288 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 WDSUB1Q8N9V3 476 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 FAM71CQ8NEG0 241 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 GPR32P1Q8NGA4 272 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 OR1J4Q8NGS1 313 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 CNOT9Q92600 299 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 PROX1Q92786 737 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 WBP1Q96G27 269 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 SH3YL1Q96HL8 342 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 LAT2Q9GZY6 243 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 ZFP64Q9NPA5 681 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 EXOSC3Q9NQT5 275 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 OLAHQ9NV23 265 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 DNAJB12Q9NXW2 375 aaKnown RBP13.85□□□□□ -0.19
ATG4D-211ENST00000589753 LOC400499M0QZD8 3231 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 ACACBO00763 2458 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 CFAP73A6NFT4 308 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 TMEM229AB2RXF0 380 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 OIP5O43482 229 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 EPPINO95925 133 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 LGI1O95970 557 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 MSX1P28360 303 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 P2RX1P51575 399 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 PLAURQ03405 335 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 FOXO1Q12778 655 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 PLEKHN1Q494U1 663 aaPredicted RBP13.84□□□□□ -0.19
ATG4D-211ENST00000589753 NADK2Q4G0N4 442 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 C1orf146Q5VVC0 180 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 CBLN3Q6UW01 205 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 FKBP9P1Q75LS8 142 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF771Q7L3S4 317 aaPredicted RBP13.84□□□□□ -0.19
ATG4D-211ENST00000589753 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF440Q8IYI8 595 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 OR4K17Q8NGC6 315 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 OR10Q1Q8NGQ4 319 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 SLC35B4Q969S0 331 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 PNPLA2Q96AD5 504 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 HSH2DQ96JZ2 352 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 DSN1Q9H410 356 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 EVA1AQ9H8M9 152 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 MED11Q9P086 117 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 HRH3Q9Y5N1 445 aa13.84□□□□□ -0.19
ATG4D-211ENST00000589753 TCRBV5S2A0A599 114 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 LRRC3CA6NJW4 275 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 AQP12BA6NM10 295 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 GMFGO60234 142 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 CBR3O75828 277 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 PRKD3O94806 890 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 RASAL1O95294 804 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 CCR4P51679 360 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 SUMO3P55854 103 aaPredicted RBP13.83□□□□□ -0.2
ATG4D-211ENST00000589753 PLGLB1Q02325 96 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 LY6DQ14210 128 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 RPUSD3Q6P087 351 aaKnown RBP13.83□□□□□ -0.2
ATG4D-211ENST00000589753 PCSK4Q6UW60 755 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 ENPP6Q6UWR7 440 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF550Q7Z398 422 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 VTCN1Q7Z7D3 282 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 AQP12AQ8IXF9 295 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 TEX19Q8NA77 164 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 ZFP62Q8NB50 900 aaPredicted RBP13.83□□□□□ -0.2
ATG4D-211ENST00000589753 TOR1AIP2Q8NFQ8 470 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 OR2M3Q8NG83 312 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
ATG4D-211ENST00000589753 PYURFQ96I23 114 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 GNRHR2Q96P88 292 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 ARHGDIGQ99819 225 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 TTTY12Q9BZ98 90 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 PTGES2Q9H7Z7 377 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 B4GALT7Q9UBV7 327 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 FBXL2Q9UKC9 423 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 SLC9A8Q9Y2E8 581 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms