RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PCDHAC1Q9H158 963 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 PTGES2Q9H7Z7 377 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 EXOSC3Q9NQT5 275 aaKnown RBP11.1□□□□□ -0.63
DNMT1-218ENST00000589294 ADPRHL2Q9NX46 363 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 QPCTLQ9NXS2 382 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 KLHL28Q9NXS3 571 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 TUBA8Q9NY65 449 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-218ENST00000589294 B4GALT7Q9UBV7 327 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 RPS6KA6Q9UK32 745 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 BAG5Q9UL15 447 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 CARD8Q9Y2G2 431 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 MRPS18CQ9Y3D5 142 aaKnown RBP11.1□□□□□ -0.63
DNMT1-218ENST00000589294 EXPH5Q8NEV8 1989 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 ATRXP46100 2492 aa11.1□□□□□ -0.63
DNMT1-218ENST00000589294 A0A0G2JMM0 328 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 A0A1W2PPB8 328 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 A0A1W2PRS3 328 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 KIR3DP1A8MWS1 328 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SYT5O00445 386 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SUV39H1O43463 412 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 HCRTR2O43614 444 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 PDE5AO76074 875 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 STAMBPO95630 424 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 LGI1O95970 557 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CRYABP02511 175 aaKnown RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SLC6A8P48029 635 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 P2RX1P51575 399 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CRYBA2P53672 197 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SUMO3P55854 103 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 DUSP7Q16829 419 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CYBRD1Q53TN4 286 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 MTX3Q5HYI7 312 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 ZNF836Q6ZNA1 936 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CBLL1Q75N03 491 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SLC22A16Q86VW1 577 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 DHFR2Q86XF0 187 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CLIP4Q8N3C7 705 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 Q8NA96 180 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 GATSQ8NAP1 163 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 OR2M3Q8NG83 312 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 OR5W2Q8NH69 310 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CNOT9Q92600 299 aaKnown RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 FAM162AQ96A26 154 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 ARSGQ96EG1 525 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 JSRP1Q96MG2 331 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 GNRHR2Q96P88 292 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 RSPO3Q9BXY4 272 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 DSN1Q9H410 356 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 DCAF13Q9NV06 445 aaKnown RBP11.09□□□□□ -0.63
DNMT1-218ENST00000589294 RLIMQ9NVW2 624 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 ANAPC2Q9UJX6 822 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 SLC13A4Q9UKG4 626 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 ICAM5Q9UMF0 924 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 CHST2Q9Y4C5 530 aa11.09□□□□□ -0.63
DNMT1-218ENST00000589294 NINQ8N4C6 2090 aa11.08□□□□□ -0.63
DNMT1-218ENST00000589294 A0A087WZY1 265 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 ACOT7O00154 380 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 FAAHO00519 579 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 ACOT8O14734 319 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 GNB5O14775 395 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 ARPC2O15144 300 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 TPST1O60507 370 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 SERPINA1P01009 418 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 FESP07332 822 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 NCK1P16333 377 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 CD247P20963 164 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 DSCR4P56555 118 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 PPIAP62937 165 aaKnown RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 MS4A2Q01362 244 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 ZNF117Q03924 483 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 SKP2Q13309 424 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 CBFBQ13951 182 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 GANABQ14697 944 aaKnown RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 INPP5JQ15735 1006 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 GLYR1Q49A26 553 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 LRRC23Q53EV4 343 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 CBLN3Q6UW01 205 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 HMGN2P46Q86SG4 172 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 SMYD1Q8NB12 490 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 OR4K17Q8NGC6 315 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 GPR119Q8TDV5 335 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 PROX1Q92786 737 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 NSMCE2Q96MF7 247 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 TTTY12Q9BZ98 90 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 UBQLN3Q9H347 655 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 OLAHQ9NV23 265 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 DNAJB12Q9NXW2 375 aaKnown RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 MED11Q9P086 117 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 SAMD4AQ9UPU9 718 aaKnown RBP11.08□□□□□ -0.64
DNMT1-218ENST00000589294 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
DNMT1-218ENST00000589294 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
DNMT1-218ENST00000589294 ANKUB1A6NFN9 424 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms