RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 HMGN4O00479 90 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF264O43296 627 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 EDF1O60869 148 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 UGT2B17O75795 530 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 TMIGD3P0DMS9 266 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 UBL4AP11441 157 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF17P17021 662 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 CTSSP25774 331 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 P2RX1P51575 399 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 CCR4P51679 360 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF136P52737 540 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 SUCLG1P53597 346 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 TFF3Q07654 80 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF141Q15928 474 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 PLPPR5Q32ZL2 321 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 COX20Q5RI15 118 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 GTPBP8Q8N3Z3 284 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 NPAS1Q99742 590 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 SPOCK3Q9BQ16 436 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 KLHDC3Q9BQ90 382 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 CCDC167Q9P0B6 97 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF629Q9UEG4 869 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 KCNE5Q9UJ90 142 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 DCTN4Q9UJW0 460 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 ICAM5Q9UMF0 924 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 LIPT1Q9Y234 373 aa12.72□□□□□ -0.37
CLPTM1-210ENST00000589158 GTF3C1Q12789 2109 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 SLC22A20A6NK97 555 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 NR5A2O00482 541 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 EIF1AYO14602 144 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 KIAA0513O60268 411 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 EIF4E2O60573 245 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 RCBTB2O95199 551 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 H6PDO95479 791 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 TGM6O95932 706 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CSTAP01040 98 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 OPN1LWP04000 364 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ZCCHC18P0CG32 403 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 NR2F1P10589 423 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ME2P23368 584 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 OPRM1P35372 400 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 EIF1P41567 113 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CRATP43155 626 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 MRPL19P49406 292 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 SUMO3P55854 103 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CLDN15P56746 228 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 RPS3AP61247 264 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 TXNL4AP83876 142 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CHRNEQ04844 493 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 FUT5Q11128 374 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 MAPK14Q16539 360 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 SYPL1Q16563 259 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 SGCBQ16585 318 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 PPP4R4Q6NUP7 873 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 SLC2A7Q6PXP3 512 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ARFGAP2Q8N6H7 521 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ANKFN1Q8N957 763 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 RELL2Q8NC24 303 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ZFP90Q8TF47 636 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 UCN2Q96RP3 112 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 PINK1Q9BXM7 581 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 TMEM185BQ9H7F4 350 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 CLCF1Q9UBD9 225 aa12.71□□□□□ -0.37
CLPTM1-210ENST00000589158 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 A0A0G2JND7 137 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 C7orf72A4D263 438 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 EEF1E1-BLOC1S5C9J1V9 151 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 EEF1E1O43324 174 aaKnown RBP12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 GUSBP08236 651 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 LINGO3P0C6S8 592 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 ETFAP13804 333 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 PRF1P14222 555 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 UQCRC1P31930 480 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 FOXF1Q12946 379 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 FOXF2Q12947 444 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 CBFBQ13951 182 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 SQLEQ14534 574 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 TOMM34Q15785 309 aaPredicted RBP12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 AGKQ53H12 422 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
CLPTM1-210ENST00000589158 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms