RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.37□□□□□ -0.91
APOC1-201ENST00000586638 ENTPD8Q5MY95 495 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 DCST1Q5T197 706 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 HLA-DQA1Q5Y7H0 255 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 SLC29A4Q7RTT9 530 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 RANBP3LQ86VV4 465 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 C8orf59Q8N0T1 100 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 GATSQ8NAP1 163 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 MORN4Q8NDC4 146 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 C7orf57Q8NEG2 295 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 OR1N1Q8NGS0 311 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 METTL21AQ8WXB1 218 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 CNOT9Q92600 299 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 GTPBP3Q969Y2 492 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 LIN37Q96GY3 246 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 SLC41A3Q96GZ6 507 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 LCORQ96JN0 433 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 LRFN5Q96NI6 719 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 GABARAPL3Q9BY60 117 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 LIN28AQ9H9Z2 209 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 DNAJB12Q9NXW2 375 aaKnown RBP9.37□□□□□ -0.91
APOC1-201ENST00000586638 CFL2Q9Y281 166 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 POFUT2Q9Y2G5 429 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 MGAQ8IWI9 3026 aa9.37□□□□□ -0.91
APOC1-201ENST00000586638 TRBV11-1A0A0K0K1C0 115 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 LOC100130705A0A1B0GUX0 176 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 A0A1W2PRQ8 180 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 OR6C76A6NM76 312 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 OR10H3O60404 316 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 STK17BO94768 372 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 SOX30O94993 753 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 TNFSF15O95150 251 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 OR5F1O95221 314 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 UTS2O95399 124 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 IL33O95760 270 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 THY1P04216 161 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 KLK3P07288 261 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 GUSBP08236 651 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 JMJD7P0C870 316 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ATP12AP54707 1039 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 PSMD4P55036 377 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 SMIM11AP58511 58 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 RAB15P59190 212 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
APOC1-201ENST00000586638 PLCXD2Q0VAA5 305 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 RAPSNQ13702 412 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 DGCR6Q14129 220 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 TRAM2Q15035 370 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 NCF4Q15080 339 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ZNF141Q15928 474 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 DECR1Q16698 335 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 CTU2Q2VPK5 515 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 TTC23Q5W5X9 447 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ZNF770Q6IQ21 691 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 PGBD2Q6P3X8 592 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 Q6ZPB1 254 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 RAB11FIP2Q7L804 512 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 GDF7Q7Z4P5 450 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 CPEB2Q7Z5Q1 589 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 MEX3DQ86XN8 651 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 NKAIN4Q8IVV8 208 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 SLC34A3Q8N130 599 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ZNF441Q8N8Z8 693 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 NFAM1Q8NET5 270 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 B3GNT7Q8NFL0 401 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 WDR36Q8NI36 951 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 SLC7A13Q8TCU3 470 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 NR4A3Q92570 626 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 PMM1Q92871 262 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 MUS81Q96NY9 551 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 CCNL2Q96S94 520 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 PITX2Q99697 317 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 ZNF696Q9H7X3 374 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 WDR54Q9H977 334 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 C19orf25Q9UFG5 118 aaPredicted RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 TESQ9UGI8 421 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 IL17BQ9UHF5 180 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
APOC1-201ENST00000586638 GMPPBQ9Y5P6 360 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 HEATR5AQ86XA9 2040 aa9.36□□□□□ -0.91
APOC1-201ENST00000586638 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
APOC1-201ENST00000586638 SERINC4A6NH21 518 aa9.35□□□□□ -0.91
APOC1-201ENST00000586638 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
APOC1-201ENST00000586638 M0R129 80 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms