RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TTI1O43156 1089 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SSX5O60225 188 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CACNG3O60359 315 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TSC22D2O75157 780 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CEACAM4O75871 244 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TNFSF15O95150 251 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PGLSO95336 258 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 GPR89BP0CG08 455 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TPBGLP0DKB5 382 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MBL2P11226 248 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 SFTPCP11686 197 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ODC1P11926 461 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 AREGP15514 252 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CDH3P22223 829 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PBLDP30039 288 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 TIA1P31483 386 aaKnown RBP eCLIP2.14□□□□□ -2.079e-7■■□□□ 13.3
VAPA-208ENST00000584796 MDH1P40925 334 aaKnown RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 MAGEA4P43358 317 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TUFMP49411 452 aaKnown RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 ACOT2P49753 483 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SULT1E1P49888 294 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ASCL1P50553 236 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 DUSP3P51452 185 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 MFAP3P55082 362 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 UCP2P55851 309 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ERVPABLB-1P60509 514 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 DPYSQ14117 519 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MAPK11Q15759 364 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ZNF74Q16587 644 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CDKN3Q16667 212 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 FAM174BQ3ZCQ3 159 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 IQCCQ4KMZ1 466 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 EIPR1Q53HC9 387 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 RIPPLY2Q5TAB7 128 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 LCN1P1Q5VSP4 162 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TXNRD3NBQ6F5E7 133 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 IRGCQ6NXR0 463 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ARMCX5Q6P1M9 558 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ZCCHC12Q6PEW1 402 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ISLR2Q6UXK2 745 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 NHLRC1Q6VVB1 395 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TMEM182Q6ZP80 229 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 Q6ZVH6 145 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PAQR9Q6ZVX9 377 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TMPRSS11FQ6ZWK6 438 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 OTUD6AQ7L8S5 288 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PHLDB2Q86SQ0 1253 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TMEM135Q86UB9 458 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SLC25A42Q86VD7 318 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 NUDT13Q86X67 352 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CCDC83Q8IWF9 413 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PHC2Q8IXK0 858 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ELMOD2Q8IZ81 293 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CDK20Q8IZL9 346 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 BATF2Q8N1L9 274 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 GPD1LQ8N335 351 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TMEM161BQ8NDZ6 487 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SPPL2BQ8TCT7 592 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SLC5A11Q8WWX8 675 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 RAD54LQ92698 747 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TMEM186Q96B77 213 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SGF29Q96ES7 293 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 BSCL2Q96G97 398 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 SAMD8Q96LT4 415 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MUS81Q96NY9 551 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MTMR9Q96QG7 549 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 CCNL2Q96S94 520 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 MAP3K3Q99759 626 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MRPL45Q9BRJ2 306 aaKnown RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 TCHPQ9BT92 498 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TDRD1Q9BXT4 1180 aaKnown RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 SDCBP2Q9H190 292 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 WNT5BQ9H1J7 359 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 LHX5Q9H2C1 402 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PARLQ9H300 379 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TCEAL2Q9H3H9 227 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 FN3KQ9H479 309 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SRD5A3Q9H8P0 318 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 HEXA-AS1Q9H8Q6 139 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 PRSS16Q9NQE7 514 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 FAM207AQ9NSI2 230 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 DPP3Q9NY33 737 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 SLCO1C1Q9NYB5 712 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 COX16Q9P0S2 106 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 DEC1Q9P2X7 70 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 THAP10Q9P2Z0 257 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 SPASTQ9UBP0 616 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TRIM10Q9UDY6 481 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 HMGXB4Q9UGU5 601 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 STUB1Q9UNE7 303 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 ITM2BQ9Y287 266 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TP53TG5Q9Y2B4 290 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 KIF25-AS1Q9Y6Z4 181 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 RYR3Q15413 4870 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 TENM1Q9UKZ4 2725 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 UBE4BO95155 1302 aa2.14□□□□□ -2.07
VAPA-208ENST00000584796 MN1Q10571 1320 aaPredicted RBP2.14□□□□□ -2.07
VAPA-208ENST00000584796 INTS1Q8N201 2190 aaKnown RBP2.13□□□□□ -2.07
VAPA-208ENST00000584796 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
VAPA-208ENST00000584796 CMYA5Q8N3K9 4069 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms