RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AURKBQ96GD4 344 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CPB2Q96IY4 423 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SPATA33Q96N06 139 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF641Q96N77 438 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6V0BQ99437 205 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 OLFM1Q99784 485 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 OMDQ99983 421 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MROQ9BYG7 248 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SPATC1LQ9H0A9 340 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SEMA6AQ9H2E6 1030 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 DPEP3Q9H4B8 488 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 POMKQ9H5K3 350 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 MAGIXQ9H6Y5 334 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 NANOGQ9H9S0 305 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 LIN28AQ9H9Z2 209 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 POPDC3Q9HBV1 291 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 SDR39U1Q9NRG7 319 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 PIGVQ9NUD9 493 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 OSER1Q9NX31 292 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 RHBDL2Q9NX52 303 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CMTM6Q9NX76 183 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 PKD2L2Q9NZM6 624 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 CCDC167Q9P0B6 97 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 HACL1Q9UJ83 578 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 FBXO5Q9UKT4 447 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 LIPT1Q9Y234 373 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 YIPF1Q9Y548 306 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 TRIM17Q9Y577 477 aa3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 COL4A4P53420 1690 aaPredicted RBP3.52□□□□□ -1.85
SMCHD1-208ENST00000583344 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TSC2P49815 1807 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 NRCAMQ92823 1304 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A0J9YYE9 177 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 RNF103-CHMP3A0A140T963 221 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SMIM28A0A1B0GU29 152 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 A0A1W2PP18 115 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LNP1A1A4G5 178 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HTR3EA5X5Y0 456 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 A8MT66 165 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 M0QX08 132 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UBXN8O00124 270 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 FXYD1O00168 92 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UPK1AO00322 258 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 NME4O00746 187 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UBFD1O14562 309 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CXCL11O14625 94 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF197O14709 1029 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 MRPS14O60783 128 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT2B11O75310 529 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SEC22BO75396 215 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SUPT3HO75486 399 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CNMDO75829 334 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CLPXO76031 633 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CDK14O94921 469 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GUCA1CO95843 209 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HPRP00739 348 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 JCHAINP01591 159 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GNAO1P09471 354 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 OCM2P0CE71 109 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 OCMP0CE72 109 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LBPP18428 481 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT1A6P19224 532 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TCN1P20061 433 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CCNA2P20248 432 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6V1B2P21281 511 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CD9P21926 228 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT1A4P22310 534 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HRH2P25021 359 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 EPHX2P34913 555 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 RFC2P35250 354 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT1A3P35503 534 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UGT1A5P35504 534 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 POLR2IP36954 125 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 RPS9P46781 194 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZFP36L2P47974 494 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SUOXP51687 545 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC7A2P52569 658 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 DAOAP59103 153 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TPI1P60174 286 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 HERVK_113P63132 956 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ARF5P84085 180 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 SP3Q02447 781 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ACVR1Q04771 509 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ARHGAP1Q07960 439 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF846Q147U1 533 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 OXA1LQ15070 435 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 MEP1BQ16820 701 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ANKDD1AQ495B1 522 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 FGD3Q5JSP0 725 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 MARCH8Q5T0T0 291 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LRIF1Q5T3J3 769 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 GPR107Q5VW38 600 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 TTC23Q5W5X9 447 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF773Q6PK81 442 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 UNC5DQ6UXZ4 953 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 LINC00696Q6ZRV3 163 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CLEC20AQ6ZU45 233 aa3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CENPVQ7Z7K6 275 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-208ENST00000583344 CCDC190Q86UF4 302 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms