RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ZNF17P17021 662 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 PSMB1P20618 241 aaKnown RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 TIA1P31483 386 aaKnown RBP eCLIP12.12□□□□□ -0.47
SS18-222ENST00000582792 PSMD4P55036 377 aaKnown RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 PRR5P85299 388 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 ACSM2AQ08AH3 577 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 SMU1Q2TAY7 513 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 XKR7Q5GH72 579 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 ACSM2BQ68CK6 577 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 PODNL1Q6PEZ8 512 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 Q6ZSR9 355 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 ZNF781Q8N8C0 355 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 OR10D3Q8NH80 312 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 LILRB1Q8NHL6 650 aaPredicted RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 LRRC8CQ8TDW0 803 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 TRMT61AQ96FX7 289 aaKnown RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 ADGRG7Q96K78 797 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 FCRL1Q96LA6 429 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 MAGEB18Q96M61 343 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 C7orf26Q96N11 449 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 REG4Q9BYZ8 158 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 C1orf109Q9NX04 203 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 MCTS1Q9ULC4 181 aaKnown RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 ABCA1O95477 2261 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 UPK1AO00322 258 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 PIP5K1BO14986 540 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 GMFGO60234 142 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 UTS2O95399 124 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 IFNA2P01563 188 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 TP53P04637 393 aaPredicted RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 DDCP20711 480 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 IDUAP35475 653 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 NCBP2P52298 156 aaKnown RBP eCLIP12.11□□□□□ -0.471e-8■■■□□ 16.9
SS18-222ENST00000582792 KIAA0040Q15053 153 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 PRSS53Q2L4Q9 553 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 CTU2Q2VPK5 515 aaKnown RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 STK32CQ86UX6 486 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 WDR75Q8IWA0 830 aaKnown RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 PHC2Q8IXK0 858 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 OR2L13Q8N349 312 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 EBPLQ9BY08 206 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 DDX18Q9NVP1 670 aaKnown RBP12.11□□□□□ -0.47
SS18-222ENST00000582792 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
SS18-222ENST00000582792 A0A087WZY1 265 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 TMEM233B4DJY2 109 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 LSM1O15116 133 aaKnown RBP12.1□□□□□ -0.47
SS18-222ENST00000582792 ADAMDEC1O15204 470 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 CD5LO43866 347 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 CXCL13O43927 109 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 SYNGR4O95473 234 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 SOD3P08294 240 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 ANXA4P09525 319 aaPredicted RBP12.1□□□□□ -0.47
SS18-222ENST00000582792 LINC00032P0C843 101 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 DANCRP0C864 163 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 RFX3P48380 749 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 ZNHIT3Q15649 155 aaPredicted RBP12.1□□□□□ -0.47
SS18-222ENST00000582792 GRAMD1BQ3KR37 738 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 HIPK1Q86Z02 1210 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 DDIASQ8IXT1 998 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
SS18-222ENST00000582792 STEAP2Q8NFT2 490 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 TACO1Q9BSH4 297 aaKnown RBP12.1□□□□□ -0.47
SS18-222ENST00000582792 GLIPR2Q9H4G4 154 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 MEAF6Q9HAF1 191 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 LRTM1Q9HBL6 345 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 TAS2R7Q9NYW3 318 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
SS18-222ENST00000582792 C7orf72A4D263 438 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 TRPC5OSA6NMA1 111 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 HDAC3O15379 428 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 KCNH1O95259 989 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 IGKV1D-16P01601 117 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 THBS1P07996 1170 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 MAPK1P28482 360 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 AGTR1P30556 359 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 GABRA3P34903 492 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 ACVR1BP36896 505 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 RAC1P63000 192 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 BTKQ06187 659 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 ZNF763Q0D2J5 394 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 C2orf80Q0P641 193 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 MAD2L1Q13257 205 aaPredicted RBP12.09□□□□□ -0.47
SS18-222ENST00000582792 NCMAPQ5T1S8 102 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 ALKBH2Q6NS38 261 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 NOXRED1Q6NXP6 359 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms