RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PRKRAO75569 313 aaKnown RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 SERPINB7O75635 380 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 NSA2O95478 260 aaKnown RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 GPR75O95800 540 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 FABP3P05413 133 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 UMODP07911 640 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 RPSAP08865 295 aaKnown RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 CD63P08962 238 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 NR2F1P10589 423 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CPMP14384 443 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 MATN1P21941 496 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 MVDP53602 400 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 AQP4P55087 323 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 OLR1P78380 273 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 HPCAP84074 193 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 STX4Q12846 297 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 BIKQ13323 160 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 ZNF169Q14929 603 aaPredicted RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 CEBPEQ15744 281 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 PRTGQ2VWP7 1150 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 NKAIN1Q4KMZ8 207 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CYBRD1Q53TN4 286 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 RHBDD2Q6NTF9 364 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 FAM180AQ6UWF9 173 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 TMEM107Q6UX40 140 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 LINC00696Q6ZRV3 163 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 SHISA6Q6ZSJ9 500 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 ZDHHC21Q8IVQ6 265 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 ZNF595Q8IYB9 648 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CA13Q8N1Q1 262 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 OR9A4Q8NGU2 314 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 MAL2Q969L2 176 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 TBC1D20Q96BZ9 403 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CNRIP1Q96F85 164 aaPredicted RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 EPS8L2Q9H6S3 715 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 COQ10BQ9H8M1 238 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 SIRT3Q9NTG7 399 aaPredicted RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 EXD2Q9NVH0 621 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 CALML5Q9NZT1 146 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 FBXL4Q9UKA2 621 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 ERVK-11Q9UQG0 969 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 LIPT1Q9Y234 373 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 MRPS2Q9Y399 296 aaKnown RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 PCDHGB3Q9Y5G1 929 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 PCM1Q15154 2024 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SEC16AO15027 2179 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 A0A0A6YYC8 382 aaPredicted RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 TRGV8A0A0C4DH27 118 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 G3V2T6 193 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 H0YIG0 161 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 I3L1I5 382 aaPredicted RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 CHST10O43529 356 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 ASNA1O43681 348 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SOX30O94993 753 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 MT-ND1P03886 318 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 BCHEP06276 602 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 STSP08842 583 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 COX6B1P14854 86 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 UQCRBP14927 111 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 NT5EP21589 574 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 AQP1P29972 269 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 CLCN2P51788 898 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 CRISP3P54108 245 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 ARSFP54793 590 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 CASP9P55211 416 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 SELENOWP63302 87 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SLC13A2Q13183 592 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 TESK1Q15569 626 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 IFI44LQ53G44 452 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SFT2D3Q587I9 215 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 HMBOX1Q6NT76 420 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 TLDC1Q6P9B6 456 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SLC44A2Q8IWA5 706 aaPredicted RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 HORMAD2Q8N7B1 307 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 OR1N1Q8NGS0 311 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 OR9A2Q8NGT5 310 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 ADAMTS15Q8TE58 950 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 XAGE5Q8WWM1 108 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 PROX1Q92786 737 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 ELP4Q96EB1 424 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 MVB12AQ96EY5 273 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 MMABQ96EY8 250 aaPredicted RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 THOC3Q96J01 351 aaKnown RBP9.43□□□□□ -0.9
SS18-221ENST00000582448 LURAP1Q96LR2 239 aa9.43□□□□□ -0.9
SS18-221ENST00000582448 ZNF681Q96N22 645 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms