RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 CDS1Q92903 461 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 MTERF3Q96E29 417 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 PPCSQ9HAB8 311 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 FANCFQ9NPI8 374 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 GLRX2Q9NS18 164 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 GIMAP2Q9UG22 337 aa12.85□□□□□ -0.35
CCDC57-214ENST00000582040 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 PIP5K1BO14986 540 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
CCDC57-214ENST00000582040 OIP5O43482 229 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 TRIM13O60858 407 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 HMGN2P05204 90 aaKnown RBP12.84□□□□□ -0.35
CCDC57-214ENST00000582040 CHRNGP07510 517 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 LINGO3P0C6S8 592 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 PSMB1P20618 241 aaKnown RBP12.84□□□□□ -0.35
CCDC57-214ENST00000582040 ELK4P28324 431 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 ZCCHC12Q6PEW1 402 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 R3HCC1LQ7Z5L2 792 aaKnown RBP12.84□□□□□ -0.35
CCDC57-214ENST00000582040 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 RNF128Q8TEB7 428 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 BTBD2Q9BX70 525 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 DUSP22Q9NRW4 184 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
CCDC57-214ENST00000582040 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 USF3Q68DE3 2245 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 HS3ST1O14792 307 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
CCDC57-214ENST00000582040 HSPA4LO95757 839 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 NUDT14O95848 222 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 EIF1P41567 113 aaKnown RBP12.83□□□□□ -0.36
CCDC57-214ENST00000582040 TP53BP2Q13625 1128 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 ALKBH2Q6NS38 261 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 LRIG3Q6UXM1 1119 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 ZNF611Q8N823 705 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 OR7A2PQ8NGA2 310 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 PHOSPHO1Q8TCT1 267 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 AGR3Q8TD06 166 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 OSTF1Q92882 214 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 REXO5Q96IC2 774 aaKnown RBP12.83□□□□□ -0.36
CCDC57-214ENST00000582040 APOPT1Q96IL0 206 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 STACQ99469 402 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 TMEM204Q9BSN7 226 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 SRXN1Q9BYN0 137 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 PIGUQ9H490 435 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 ATP6V1HQ9UI12 483 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 GPR52Q9Y2T5 361 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 SNX8Q9Y5X2 465 aa12.83□□□□□ -0.36
CCDC57-214ENST00000582040 PRR14LQ5THK1 2151 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TMEM114B3SHH9 223 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 PABPC4LP0CB38 370 aaKnown RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 LAMP1P11279 417 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 NID1P14543 1247 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 DDX5P17844 614 aaKnown RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 MAPK1P28482 360 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 RPL3P39023 403 aaKnown RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CARD18P57730 90 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 PTGR1Q14914 329 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 MLC1Q15049 377 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 XKR7Q5GH72 579 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TMEM201Q5SNT2 666 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 DCST2Q5T1A1 773 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CBLN3Q6UW01 205 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 PRIMA1Q86XR5 153 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CPNE4Q96A23 557 aaPredicted RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
CCDC57-214ENST00000582040 C1orf50Q9BV19 199 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 MECRQ9BV79 373 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 OR10A4Q9H209 315 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CXorf36Q9H7Y0 433 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 COQ10BQ9H8M1 238 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 MKS1Q9NXB0 559 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 KLHL13Q9P2N7 655 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 CARD8Q9Y2G2 431 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 TRAF6Q9Y4K3 522 aa12.82□□□□□ -0.36
CCDC57-214ENST00000582040 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
CCDC57-214ENST00000582040 EFNA2O43921 213 aa12.81□□□□□ -0.36
CCDC57-214ENST00000582040 NPHS1O60500 1241 aa12.81□□□□□ -0.36
CCDC57-214ENST00000582040 PEX11AO75192 247 aa12.81□□□□□ -0.36
CCDC57-214ENST00000582040 GCM2O75603 506 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms