RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OR8D2Q9GZM6 311 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 FN3KQ9H479 309 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SYNDIG1Q9H7V2 258 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 RYDENQ9NUL5 291 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 MKL2Q9ULH7 1088 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 EXOSC1Q9Y3B2 195 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CHST2Q9Y4C5 530 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SNRNP200O75643 2136 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 A0A0B4J2E0 115 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 A0A1B0GX12 115 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 EFCAB9A8MZ26 197 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 NPIPB9F8W1W9 429 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 MYL12BO14950 172 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 TO15178 435 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 GABARAPO95166 117 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 IFNGP01579 166 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 CD63P08962 238 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 GKN3PP0CG01 181 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 CKMT1AP12532 417 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 CD36P16671 472 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 SLC15A1P46059 708 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 SLC9A3P48764 834 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 NUDT6P53370 316 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 GP2P55259 537 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 RAB40BQ12829 278 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 IL11RAQ14626 422 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 PGGHGQ32M88 737 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 ALG10BQ5I7T1 473 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 GUSBP11Q6P575 273 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 RTL4Q6ZR62 310 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 PPP1R3BQ86XI6 285 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 OR5L2Q8NGL0 311 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 IFI44Q8TCB0 444 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 TMEM255BQ8WV15 326 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 CNOT9Q92600 299 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 TP53INP1Q96A56 240 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 BPIFA2Q96DR5 249 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 DTNBP1Q96EV8 351 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 LOXL4Q96JB6 756 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 LRR1Q96L50 414 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 LRFN5Q96NI6 719 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 FBXO34Q9NWN3 711 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 SIDT1Q9NXL6 827 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 DNAJB12Q9NXW2 375 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 GPR83Q9NYM4 423 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 NXT1Q9UKK6 140 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 TMEM184BQ9Y519 407 aaPredicted RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 CLDN16Q9Y5I7 305 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 SCN3AQ9NY46 2000 aa10.27□□□□□ -0.77
SKA2-204ENST00000578519 TDRD6O60522 2096 aaKnown RBP10.27□□□□□ -0.77
SKA2-204ENST00000578519 IGLV3-12A0A075B6K2 115 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 NPIPA5A0A0B4J1W7 369 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 A0A1B0GWA3 101 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 TMEM221A6NGB7 291 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 A8MUA0 341 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 NPIPA7E9PJI5 369 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 M0R296 226 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 KLF4O43474 513 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 EIF4E2O60573 245 aaKnown RBP10.26□□□□□ -0.77
SKA2-204ENST00000578519 REM1O75628 298 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 SCRG1O75711 98 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ATE1O95260 518 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ONECUT2O95948 504 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 IGF2P01344 180 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 TP53P04637 393 aaPredicted RBP10.26□□□□□ -0.77
SKA2-204ENST00000578519 ZNF883P0CG24 379 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 NPIPA8P0DM63 369 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
SKA2-204ENST00000578519 UBL4AP11441 157 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 TBXA2RP21731 343 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 PAICSP22234 425 aaKnown RBP10.26□□□□□ -0.77
SKA2-204ENST00000578519 ACVR2AP27037 513 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 SLC6A6P31641 620 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 UGT2B10P36537 528 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 CAPZA2P47755 286 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 PNLIPRP2P54317 469 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 HOXC5Q00444 222 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 EFR3AQ14156 821 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 IRF3Q14653 427 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 MOGQ16653 247 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ANKDD1AQ495B1 522 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 NKAIN1Q4KMZ8 207 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 KLHL26Q53HC5 615 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 TRIM61Q5EBN2 209 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ARMCX4Q5H9R4 360 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 C1orf189Q5VU69 101 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 LAIR1Q6GTX8 287 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 WBP2NLQ6ICG8 309 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ACSM5Q6NUN0 579 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ZC3H14Q6PJT7 736 aaKnown RBP10.26□□□□□ -0.77
SKA2-204ENST00000578519 SMARCD3Q6STE5 483 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 NPSR1Q6W5P4 371 aa10.26□□□□□ -0.77
SKA2-204ENST00000578519 ZNF620Q6ZNG0 422 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms