RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SLC6A9P48067 706 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 SLX4IPQ5VYV7 408 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 HCAR2Q8TDS4 363 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 TMEM255BQ8WV15 326 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 PTCHD1Q96NR3 888 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 KLHL9Q9P2J3 617 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 GOSR2O14653 212 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC22A5O76082 557 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 HOXB2P14652 356 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 KCNJ5P48544 419 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 CTXN1P60606 82 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ACTC1P68032 377 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ACTA1P68133 377 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF33BQ06732 778 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 CDNFQ49AH0 187 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC22A10Q63ZE4 541 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SAXO2Q658L1 398 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 FAM111BQ6SJ93 734 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 APOOLQ6UXV4 268 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 PDZD9Q8IXQ8 264 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SIMC1Q8NDZ2 872 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ACTR6Q9GZN1 396 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SCP2D1Q9UJQ7 156 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 COPS3Q9UNS2 423 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 TMEM150CB9EJG8 249 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 AMY2AP04746 511 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 TIAL1Q01085 375 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 CFAP77Q6ZQR2 320 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 NUP54Q7Z3B4 507 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC16A11Q8NCK7 471 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 TAPBPLQ9BX59 468 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 TAAR2Q9P1P5 351 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 DOK2O60496 412 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 KAT7O95251 611 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 AQP2P41181 271 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 CRMP1Q14194 572 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ITPRIPL2Q3MIP1 535 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 JSRP1Q96MG2 331 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 DPYSL5Q9BPU6 564 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 PINK1Q9BXM7 581 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ATP13A2Q9NQ11 1180 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 RXFP3Q9NSD7 469 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 ATG4BQ9Y4P1 393 aa16.75■□□□□ 0.27
ATPAF1-214ENST00000576409 A0A087WUU8 490 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF878C9JN71 531 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 CSF3P09919 207 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 INSL4Q14641 139 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 ALG11Q2TAA5 492 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 TCEAL5Q5H9L2 206 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 TM4SF18Q96CE8 201 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 CPEB1Q9BZB8 566 aaKnown RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 PIGUQ9H490 435 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 STRCQ7RTU9 1775 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 A0A0B4J203 849 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 SCO2O43819 266 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 AKR1C4P17516 323 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 HOXA9P31269 272 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 GRK5P34947 590 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 MCCD1P59942 119 aaPredicted RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 TSPAN31Q12999 210 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 FGL2Q14314 439 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 LRRC28Q86X40 367 aaPredicted RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 CLDN22Q8N7P3 220 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 NANOGP1Q8N7R0 232 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 ZC3H10Q96K80 434 aaKnown RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 MICU1Q9BPX6 476 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 KATNB1Q9BVA0 655 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 KLHL42Q9P2K6 505 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 M0R036 132 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 SIX6O95475 246 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 GALEQ14376 348 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 TMEM35AQ53FP2 167 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 RFPL4BQ6ZWI9 263 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 KANSL1Q7Z3B3 1105 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 SIAH3Q8IW03 269 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 MOAP1Q96BY2 351 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 C1GALT1Q9NS00 363 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC6A14Q9UN76 642 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 DIMT1Q9UNQ2 313 aaKnown RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 PLCL2Q9UPR0 1127 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 METTL21EPA6NDL7 271 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 AIFM1O95831 613 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 PRKACAP17612 351 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 PCMT1P22061 227 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 NDUFS1P28331 727 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 KIAA0040Q15053 153 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 FAM71E1Q6IPT2 247 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 FAHD1Q6P587 224 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 C3P1Q6ZMU1 363 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 OR2M4Q96R27 311 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 MFFQ9GZY8 342 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 TMEM184CQ9NVA4 438 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 NAALAD2Q9Y3Q0 740 aa16.74■□□□□ 0.27
ATPAF1-214ENST00000576409 HEPACAM2A8MVW5 462 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms