RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RGS14O43566 566 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 LYZL6O75951 148 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 NTN1O95631 604 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 OXSR1O95747 527 aaPredicted RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 LINGO3P0C6S8 592 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 PRPS2P11908 318 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 ZNF16P17020 682 aaPredicted RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 IGFBP5P24593 272 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 HMOX2P30519 316 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 PHBP35232 272 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 SFTPDP35247 375 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 HSD17B3P37058 310 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 OR3A2P47893 321 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 SERPINB4P48594 390 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 FABP6P51161 128 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 CDH13P55290 713 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 RAC3P60763 192 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 RAE1P78406 368 aaKnown RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 CLCQ05315 142 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 SLC18A2Q05940 514 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 ZNF763Q0D2J5 394 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 C11orf71Q6IPW1 123 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 GPRIN3Q6ZVF9 776 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 ATG4DQ86TL0 474 aaPredicted RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 PIAS4Q8N2W9 510 aaPredicted RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 ZNF525Q8N782 197 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 ARIH2OSQ8N7S6 290 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 CDRT4Q8N9R6 151 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 ZNF540Q8NDQ6 660 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 OR6Y1Q8NGX8 325 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 OR4C3Q8NH37 302 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 FAM76AQ8TAV0 307 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 MRRFQ96E11 262 aaKnown RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 ACPTQ9BZG2 426 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 GLIPR2Q9H4G4 154 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 GRHL1Q9NZI5 618 aa7.96□□□□□ -1.14
SMG6-218ENST00000575454 CHD3Q12873 2000 aaKnown RBP7.96□□□□□ -1.14
SMG6-218ENST00000575454 NCKAP5O14513 1909 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 DSCAMO60469 2012 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.95□□□□□ -1.143e-6■■■□□ 17.2
SMG6-218ENST00000575454 GXYLT2A0PJZ3 443 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 ZNF724A8MTY0 619 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 E7EQL1 145 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 H3BNH8 94 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 SPRY1O43609 319 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 TCF21O43680 179 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 OR4F21O95013 312 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 NKX2-2O95096 273 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PGM3O95394 542 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 IGKV1D-16P01601 117 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 INHBAP08476 426 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 TAC1P20366 129 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PTNP21246 168 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 SLC7A1P30825 629 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PDLIM4P50479 330 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 GNG11P61952 73 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 GUCY2DQ02846 1103 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 TMEM176BQ3YBM2 270 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 SPDYAQ5MJ70 313 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 UBAP2Q5T6F2 1119 aaKnown RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 C1QTNF12Q5T7M4 302 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 C12orf54Q6X4T0 127 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 IKBIPQ70UQ0 350 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 MTERF4Q7Z6M4 381 aaKnown RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 GALNT5Q7Z7M9 940 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 ZNF100Q8IYN0 542 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PLD6Q8N2A8 252 aaKnown RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 OR2W6PQ8NHA6 318 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 POC1BQ8TC44 478 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 FAM110BQ8TC76 370 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 PIK3R3Q92569 461 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 HOXB13Q92826 284 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 APIPQ96GX9 242 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 SH3YL1Q96HL8 342 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 ZNF382Q96SR6 550 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 NAPGQ99747 312 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 PIMREGQ9BSJ6 248 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 INPP5KQ9BT40 448 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 EBPLQ9BY08 206 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 SRXN1Q9BYN0 137 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 HOXD1Q9GZZ0 328 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 RAB17Q9H0T7 212 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 CHODLQ9H9P2 273 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 FKRPQ9H9S5 495 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 MYOZ1Q9NP98 299 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 MYNNQ9NPC7 610 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 ZNF225Q9UK10 706 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 ACTL7BQ9Y614 415 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 GPC6Q9Y625 555 aaPredicted RBP7.95□□□□□ -1.14
SMG6-218ENST00000575454 FKBP7Q9Y680 259 aa7.95□□□□□ -1.14
SMG6-218ENST00000575454 CIB4A0PJX0 185 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 SERTM1A2A2V5 107 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 A8MT66 165 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 KIAA0513O60268 411 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 SUPT7LO94864 414 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 KCNK2O95069 426 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 ENO1P06733 434 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 APEHP13798 732 aaKnown RBP7.94□□□□□ -1.14
SMG6-218ENST00000575454 CHN1P15882 459 aa7.94□□□□□ -1.14
SMG6-218ENST00000575454 TSPAN8P19075 237 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms