RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CNRIP1Q96F85 164 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 COQ10AQ96MF6 247 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 AMDHD1Q96NU7 426 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 APOOQ9BUR5 198 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RNF32Q9H0A6 362 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR52A5Q9H2C5 316 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 DDX31Q9H8H2 851 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PNO1Q9NRX1 252 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RBFOX1Q9NWB1 397 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SLCO1C1Q9NYB5 712 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SPATA2Q9UM82 520 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 GSTK1Q9Y2Q3 226 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 COLEC10Q9Y6Z7 277 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SPACA6W5XKT8 324 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 NOTCH4Q99466 2003 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 NBASA2RRP1 2371 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 DAPL1A0PJW8 107 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PEX12O00623 359 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SLC30A4O14863 429 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 VEGFDO43915 354 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 LILRB3O75022 631 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SOD1P00441 154 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CISD3P0C7P0 127 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OSMP13725 252 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 AHCYP23526 432 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RPS27P42677 84 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ANXA11P50995 505 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ATP12AP54707 1039 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 BHLHB9Q6PI77 547 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RPTNQ6XPR3 784 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 KIF18BQ86Y91 864 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 GRAMD2AQ8IUY3 354 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CRIPAKQ8N1N5 446 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 LSMEM1Q8N8F7 131 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 FAM181AQ8N9Y4 354 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RPLP0P6Q8NHW5 317 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 APOBEC4Q8WW27 367 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR1E3Q8WZA6 343 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RIT1Q92963 219 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SLC25A36Q96CQ1 311 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 VWCEQ96DN2 955 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ATF6BQ99941 703 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 MND1Q9BWT6 205 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ISG20L2Q9H9L3 353 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ZFP64Q9NPA5 681 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 MYNNQ9NPC7 610 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CNOT2Q9NZN8 540 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 MYEF2Q9P2K5 600 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SIRT4Q9Y6E7 314 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ANAPC1Q9H1A4 1944 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 POM121CA8CG34 1229 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 INMT-MINDY4F8WBC2 141 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SRPRAP08240 638 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PRPH2P23942 346 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 HSD3B2P26439 372 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PYCR1P32322 319 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CCR6P51684 374 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 GPR176Q14439 515 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SERPINA12Q8IW75 414 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ARL14Q8N4G2 192 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF680Q8NEM1 530 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR8D4Q8NGM9 314 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR9A4Q8NGU2 314 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF582Q96NG8 517 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR7D2Q96RA2 312 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SPATA5L1Q9BVQ7 753 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RETREG1Q9H6L5 497 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 HEXA-AS1Q9H8Q6 139 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 NEUROD4Q9HD90 331 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 NUDT15Q9NV35 164 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 HEATR5BQ9P2D3 2071 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 NPIPB8E9PQR5 432 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 TRIM77I1YAP6 450 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CHP2O43745 196 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 B3GALT2O43825 422 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PDGFAP04085 211 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 LIMS3P0CW19 117 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 LIMS4P0CW20 117 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CLUP10909 449 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ICAM2P13598 275 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 EPHA5P54756 1037 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PCBP3P57721 371 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RPL6Q02878 288 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 DLX2Q07687 328 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 CRYZQ08257 329 aaKnown RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SQSTM1Q13501 440 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 FGL2Q14314 439 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 MLF2Q15773 248 aaPredicted RBP7.95□□□□□ -1.14
RPAIN-215ENST00000575112 RPE65Q16518 533 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 PRAMEF17Q5VTA0 474 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 VASNQ6EMK4 673 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 SLC27A4Q6P1M0 643 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 LRRC20Q8TCA0 184 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 TRIM63Q969Q1 353 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 FCRL1Q96LA6 429 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 KCTD7Q96MP8 289 aa7.95□□□□□ -1.14
RPAIN-215ENST00000575112 OR2M4Q96R27 311 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms