RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CLOCKO15516 846 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 TPST1O60507 370 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 WDR1O75083 606 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ERAL1O75616 437 aaKnown RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 PPM1BO75688 479 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SNX4O95219 450 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 C6orf47O95873 294 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 IFNA14P01570 189 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 COX6B1P14854 86 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ACVR2AP27037 513 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 PCGF2P35227 344 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SOAT1P35610 550 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FEN1P39748 380 aaKnown RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 MAGEA8P43361 318 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ALDH9A1P49189 494 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 MAN2A2P49641 1150 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 EMDP50402 254 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 GZMMP51124 257 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FBXW4P57775 412 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 DCAF7P61962 342 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 PSPHP78330 225 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 RPP38P78345 283 aaKnown RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 TFF3Q07654 80 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 EPS8Q12929 822 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SLC10A1Q14973 349 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 MLC1Q15049 377 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 RGNQ15493 299 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 LTB4RQ15722 352 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 GXYLT1Q4G148 440 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FNDC7Q5VTL7 733 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 PPP4R4Q6NUP7 873 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 BHLHB9Q6PI77 547 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FAM111BQ6SJ93 734 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ZZZ3Q8IYH5 903 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SVOPLQ8N434 492 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 NEIL3Q8TAT5 605 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FBXO30Q8TB52 745 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 RND1Q92730 232 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 DIO2Q92813 273 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 HGDQ93099 445 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 HSPBAP1Q96EW2 488 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 TMEM41AQ96HV5 264 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 PYURFQ96I23 114 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 LCORQ96JN0 433 aaPredicted RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 ITPAQ9BY32 194 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 IKZF5Q9H5V7 419 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SLC6A13Q9NSD5 602 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ADPRHL2Q9NX46 363 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 THUMPD1Q9NXG2 353 aaKnown RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 TAS2R7Q9NYW3 318 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 SPRR3Q9UBC9 169 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 PRODH2Q9UF12 536 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 FAF1Q9UNN5 650 aaPredicted RBP9.67□□□□□ -0.86
LITAF-216ENST00000574848 RNF6Q9Y252 685 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 ZNF780BQ9Y6R6 833 aa9.67□□□□□ -0.86
LITAF-216ENST00000574848 HCFC1P51610 2035 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 TMEM247A6NEH6 219 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 PLOD3O60568 738 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 SLITRK5O94991 958 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 SERPINA1P01009 418 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 HPNP05981 417 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 HOXD4P09016 255 aaPredicted RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 IFI6P09912 130 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 GABRA1P14867 456 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 DRD5P21918 477 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 ELAVL4P26378 380 aaKnown RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 CASP3P42574 277 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 CRATP43155 626 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 PPICP45877 212 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 PRIM2P49643 509 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 ARHGDIAP52565 204 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 MANFP55145 182 aaKnown RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 NUP107P57740 925 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 HBA1P69905 142 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 TXNL4AP83876 142 aaKnown RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 SNTA1Q13424 505 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 EXOSC7Q15024 291 aaKnown RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 SPDYE7PQ495Y7 208 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 TRMT12Q53H54 448 aaKnown RBP9.66□□□□□ -0.86
LITAF-216ENST00000574848 ZNF385BQ569K4 471 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 GCNT6Q5T4J0 391 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 RTL6Q6ICC9 239 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 HMBOX1Q6NT76 420 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 TMEM64Q6YI46 380 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 B3GNT6Q6ZMB0 384 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 AMIGO2Q86SJ2 522 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 GALNT4Q8N4A0 578 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 SIMC1Q8NDZ2 872 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 OR52R1Q8NGF1 315 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 LILRB4Q8NHJ6 448 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 RNF138Q8WVD3 245 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 LZICQ8WZA0 190 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 MOAP1Q96BY2 351 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 C14orf79Q96F83 325 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 VSTM2LQ96N03 204 aa9.66□□□□□ -0.86
LITAF-216ENST00000574848 CIB1Q99828 191 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms