RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SHFQ7M4L6 423 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 OR52L1Q8NGH7 329 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 ABTB1Q969K4 478 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-208ENST00000574755 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 ZNF578Q96N58 590 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-208ENST00000574755 PTCHD1Q96NR3 888 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 CHRNA10Q9GZZ6 450 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 MED17Q9NVC6 651 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
VPS33B-208ENST00000574755 SYNDIG1LA6NDD5 238 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 TMEM150CB9EJG8 249 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 GPX5O75715 221 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 SLC2A10O95528 541 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 HMGN1P05114 100 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 DCNP07585 359 aaKnown RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CT45A8P0DMV1 189 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CT45A9P0DMV2 189 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 SAGP10523 405 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 BMP7P18075 431 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CXCL12P48061 93 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 GAS1P54826 345 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 BNC1Q01954 994 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 PRKCDQ05655 676 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 ATP1A4Q13733 1029 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 RGS21Q2M5E4 152 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CT45A2Q5DJT8 189 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 SNAP47Q5SQN1 464 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 MFSD4AQ8N468 514 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 OR9Q1Q8NGQ5 310 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 B4GALNT2Q8NHY0 566 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 HS6ST2Q96MM7 605 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 EVA1AQ9H8M9 152 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 FGF20Q9NP95 211 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CUTCQ9NTM9 273 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 DNAJB12Q9NXW2 375 aaKnown RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 IGHV1OR21-1A0A087WYE8 117 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CHP2O43745 196 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 NUDT21O43809 227 aaKnown RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 ADAM11O75078 769 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 GUSBP08236 651 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 ZGLP1P0C6A0 271 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 WNT4P56705 351 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 HSD11B2P80365 405 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 FUT7Q11130 342 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 SERTAD2Q14140 314 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 AADACL4Q5VUY2 407 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 LIPKQ5VXJ0 399 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 Q6ZNX1 250 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 BMP8AQ7Z5Y6 402 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-208ENST00000574755 NDUFB11Q9NX14 153 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 GALNT8Q9NY28 637 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 CBLCQ9ULV8 474 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 TMEM5Q9Y2B1 443 aa12.98□□□□□ -0.33
VPS33B-208ENST00000574755 A0A0B4J2E0 115 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 A0A1B0GWA3 101 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 A0A1B0GX12 115 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 WWP2O00308 870 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 DUX1O43812 170 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 ENDOUP21128 410 aaKnown RBP12.97□□□□□ -0.33
VPS33B-208ENST00000574755 SOX6P35712 828 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 OR1D4P47884 311 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 NXNL2Q5VZ03 156 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 SMARCD3Q6STE5 483 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 PHC2Q8IXK0 858 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 CLDN23Q96B33 292 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 PELOQ9BRX2 385 aaKnown RBP12.97□□□□□ -0.33
VPS33B-208ENST00000574755 CDADC1Q9BWV3 514 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 MEPEQ9NQ76 525 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-208ENST00000574755 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
VPS33B-208ENST00000574755 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 CFL2Q9Y281 166 aa12.97□□□□□ -0.33
VPS33B-208ENST00000574755 A0A1B0GVT2 93 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 C17orf105B2RV13 164 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 ACAA2P42765 397 aaKnown RBP12.96□□□□□ -0.33
VPS33B-208ENST00000574755 FXYD6P3P58550 94 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 FGFBP1Q14512 234 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 ZNF141Q15928 474 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 SLC35F3Q8IY50 421 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 BCORP1Q8N888 145 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 Q8N9G6 341 aaPredicted RBP12.96□□□□□ -0.33
VPS33B-208ENST00000574755 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
VPS33B-208ENST00000574755 DACH2Q96NX9 599 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms