RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PPP1R3BQ86XI6 285 aa26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 LSMEM1Q8N8F7 131 aa26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 TMEM255BQ8WV15 326 aa26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 LCORQ96JN0 433 aaPredicted RBP26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 NUDT9Q9BW91 350 aa26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 KRCC1Q9NPI7 259 aaPredicted RBP26.22■■□□□ 1.79
CTDNEP1-210ENST00000574322 VGLL3A8MV65 326 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 GP1BAP07359 652 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 ZGLP1P0C6A0 271 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 DCKP27707 260 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 ADH7P40394 386 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 STAT5AP42229 794 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 MVKQ03426 396 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 IL11RAQ14626 422 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 ZNF550Q7Z398 422 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 MRGPREQ86SM8 312 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 KIF18BQ86Y91 864 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 POGLUT1Q8NBL1 392 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 OR1N1Q8NGS0 311 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 FAM122AQ96E09 287 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 DOK1Q99704 481 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 TRIM2Q9C040 744 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 TMEM27Q9HBJ8 222 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 PTTG2Q9NZH5 202 aa26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 PTPRZ1P23471 2315 aaPredicted RBP26.21■■□□□ 1.79
CTDNEP1-210ENST00000574322 ASCC3Q8N3C0 2202 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 OR6C76A6NM76 312 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 LDOC1O95751 146 aaPredicted RBP26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 DCDP81605 110 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 OCA2Q04671 838 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 NNATQ16517 81 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 KLHL26Q53HC5 615 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 SLC25A30Q5SVS4 291 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 NRMQ8IXM6 262 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 SVOPQ8N4V2 548 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 OR8J1Q8NGP2 316 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 OR4C3Q8NH37 302 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 RHNO1Q9BSD3 238 aa26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 NXF5Q9H1B4 397 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 ZNF223Q9UK11 482 aaPredicted RBP26.2■■□□□ 1.79
CTDNEP1-210ENST00000574322 A0A0B4J2E0 115 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 A0A1B0GX12 115 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 SERINC4A6NH21 518 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 TO15178 435 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 ATXN8OSP0DMR3 200 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 PHF19Q5T6S3 580 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CASP12Q6UXS9 341 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 B3GNT6Q6ZMB0 384 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 OVCH1Q7RTY7 1134 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CLVS1Q8IUQ0 354 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CLDN22Q8N7P3 220 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 FAR1Q8WVX9 515 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 GGHQ92820 318 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 MYDGFQ969H8 173 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 NMD3Q96D46 503 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CLIP3Q96DZ5 547 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 FAM46AQ96IP4 442 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CCDC90BQ9GZT6 254 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 LHPPQ9H008 270 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 CLN6Q9NWW5 311 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 MRTO4Q9UKD2 239 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 VSTM2BA6NLU5 285 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 NTN1O95631 604 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 ACVR2AP27037 513 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 EFNB1P98172 346 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 EBPQ15125 230 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 ZNF614Q8N883 585 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 POLDIP3Q9BY77 421 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 UBQLN4Q9NRR5 601 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 OCIAD1Q9NX40 245 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 SLC35A3Q9Y2D2 325 aa26.19■■□□□ 1.78
CTDNEP1-210ENST00000574322 EFCAB7A8K855 629 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 CBFA2T3O75081 653 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 MT-ND2P03891 347 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 ACP1P24666 158 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 GPR143P51810 404 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 SMSP52788 366 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 GINS1Q14691 196 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 WDR88Q6ZMY6 472 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 AHSA2Q719I0 299 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 PRSS58Q8IYP2 241 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 C17orf47Q8NEP4 570 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 WDR36Q8NI36 951 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 ISOC1Q96CN7 298 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 HS6ST2Q96MM7 605 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 Q96MT0 163 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 COPS4Q9BT78 406 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 SLC26A1Q9H2B4 701 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 IL20Q9NYY1 176 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 CNOT2Q9NZN8 540 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 CNIH4Q9P003 139 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 COPS7AQ9UBW8 275 aa26.18■■□□□ 1.78
CTDNEP1-210ENST00000574322 C2orf92A0A1B0GVN3 265 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 CHP2O43745 196 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 CSTF2P33240 577 aaKnown RBP eCLIP26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 OCLNQ16625 522 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 PIP4P1Q86T03 277 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 C9orf40Q8IXQ3 194 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 ZNF440Q8IYI8 595 aa26.17■■□□□ 1.78
CTDNEP1-210ENST00000574322 BMPERQ8N8U9 685 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms