RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NUDT15Q9NV35 164 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 ZMIZ1Q9ULJ6 1067 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 DUXAA6NLW8 204 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 PAK4O96013 591 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 GKN3PP0CG01 181 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 F8A1P23610 371 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 HTR2AP28223 471 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 EEF1A1P68104 462 aaKnown RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 CAMK1Q14012 370 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 DUSP5Q16690 384 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 AMIGO1Q86WK6 493 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 TIGD4Q8IY51 512 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MFSD9Q8NBP5 474 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 OR11H7Q8NGC8 314 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 ABHD4Q8TB40 342 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 TTC9Q92623 222 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 TRIM43Q96BQ3 446 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 ZNF707Q96C28 371 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 HS6ST2Q96MM7 605 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 ZNF624Q9P2J8 865 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 TBC1D3BA6NDS4 549 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SLC9B1P1A6NJY1 282 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MID1O15344 667 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SOX30O94993 753 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 CRYZL1O95825 349 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 PRMT2P55345 433 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SHC2P98077 582 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 GPR68Q15743 365 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MAPK14Q16539 360 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SLC36A2Q495M3 483 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 AGBL4Q5VU57 503 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 RPTNQ6XPR3 784 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 THSD4Q6ZMP0 1018 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SRFBP1Q8NEF9 429 aaKnown RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 TRMT10AQ8TBZ6 339 aaKnown RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 DOK4Q8TEW6 326 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SCMH1Q96GD3 660 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MED30Q96HR3 178 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MS4A4EQ96PG1 132 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 CD180Q99467 661 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 MKRN2Q9H000 416 aaKnown RBP17.71■□□□□ 0.43
SCARF1-206ENST00000573852 FN3KQ9H479 309 aa17.71■□□□□ 0.43
SCARF1-206ENST00000573852 SCN2AQ99250 2005 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 C7orf66A4D0T2 115 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 PLPP2O43688 288 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 RNGTTO60942 597 aaKnown RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 NOS1APO75052 506 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 RFPL3O75679 317 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 IL9P15248 144 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 UQCRC1P31930 480 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 HTRA4P83105 476 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 FGL2Q14314 439 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 FCRLBQ6BAA4 426 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 OR4N5Q8IXE1 308 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 ELMOD2Q8IZ81 293 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 OR52L1Q8NGH7 329 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 TEAD3Q99594 435 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 SARGQ9BW04 601 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 RAB11FIP5Q9BXF6 653 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 OR51V1Q9H2C8 321 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 PIGUQ9H490 435 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 SLCO1C1Q9NYB5 712 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 SERGEFQ9UGK8 458 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 FZD7O75084 574 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 DHFRP00374 187 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 MT-ND5P03915 603 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 HNRNPA1P09651 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 POU3F3P20264 500 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 ACVR1BP36896 505 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 SLC16A1P53985 500 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 RPS7P62081 194 aaKnown RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 ARHGAP11BQ3KRB8 267 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 LNX2Q8N448 690 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 OR8H1Q8NGG4 311 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 ARSGQ96EG1 525 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 ZFP64Q9NPA5 681 aa17.7■□□□□ 0.42
SCARF1-206ENST00000573852 KRCC1Q9NPI7 259 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-206ENST00000573852 A0A1W2PQ72 361 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TRAPPC13A5PLN9 417 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TIMP1P01033 207 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 CLUP10909 449 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 NOS3P29474 1203 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TJAP1Q5JTD0 557 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 RTL10Q7L3V2 364 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 LRRC25Q8N386 305 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 LRRC17Q8N6Y2 441 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 SDF2Q99470 211 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 NDC1Q9BTX1 674 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 LYARQ9NX58 379 aaKnown RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 CLDND1Q9NY35 253 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 NTMQ9P121 344 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 MOSPD1Q9UJG1 213 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TBC1D3KA0A087X1G2 549 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TBC1D3FA6NER0 549 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 LEUTXA8MZ59 168 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 J3QLW9 94 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ICMTO60725 284 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 LYPD3O95274 346 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF19P17023 458 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms