RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 CHERPQ8IWX8 916 aaKnown RBP20.06■□□□□ 0.8
RAB40B-207ENST00000572603 PEX5LQ8IYB4 626 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 MICU2Q8IYU8 434 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 OR4K17Q8NGC6 315 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 ALG2Q9H553 416 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.06■□□□□ 0.8
RAB40B-207ENST00000572603 DNAJB12Q9NXW2 375 aaKnown RBP20.06■□□□□ 0.8
RAB40B-207ENST00000572603 SLC35A3Q9Y2D2 325 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 CARD8Q9Y2G2 431 aa20.06■□□□□ 0.8
RAB40B-207ENST00000572603 ZNF264O43296 627 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 HCRTR2O43614 444 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 EIF4E2O60573 245 aaKnown RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 CSTAP01040 98 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 PABPC4LP0CB38 370 aaKnown RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 SRD5A2P31213 254 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 KCNJ10P78508 379 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 MXRA7P84157 204 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 VEZF1Q14119 521 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 MRPL2Q5T653 305 aaKnown RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 C16orf89Q6UX73 402 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 CCDC80Q76M96 950 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 EIF3MQ7L2H7 374 aaKnown RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 COMTD1Q86VU5 262 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 SPPL2CQ8IUH8 684 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 CMIPQ8IY22 773 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 DEFB107AQ8IZN7 70 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 FAM83FQ8NEG4 500 aaPredicted RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 B4GALNT2Q8NHY0 566 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 CNOT9Q92600 299 aaKnown RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 ARSGQ96EG1 525 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 C1GALT1C1Q96EU7 318 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 LAT2Q9GZY6 243 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 DEFB127Q9H1M4 99 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 SLC6A15Q9H2J7 730 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 HHATLQ9HCP6 504 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 ACKR4Q9NPB9 350 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 NDE1Q9NXR1 346 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 PACSIN3Q9UKS6 424 aa20.05■□□□□ 0.8
RAB40B-207ENST00000572603 RP1L1Q8IWN7 2480 aaPredicted RBP20.05■□□□□ 0.8
RAB40B-207ENST00000572603 CDHR4A6H8M9 788 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 PRORSD1PA6NEY8 169 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 GMFGO60234 142 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 ADAM11O75078 769 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 EPPINO95925 133 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 EDN3P14138 238 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 IL7RP16871 459 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 ENDOUP21128 410 aaKnown RBP20.04■□□□□ 0.8
RAB40B-207ENST00000572603 MSX1P28360 303 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 GTF3C1Q12789 2109 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 EIPR1Q53HC9 387 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 FGD2Q7Z6J4 655 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 IFNEQ86WN2 208 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 ZNF524Q96C55 264 aa20.04■□□□□ 0.8
RAB40B-207ENST00000572603 ELOVL7A1L3X0 281 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 ANKUB1A6NFN9 424 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 ZIC3O60481 467 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DNAJA2O60884 412 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 MFN2O95140 757 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DPP4P27487 766 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 P2RX1P51575 399 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 SUMO3P55854 103 aaPredicted RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DSCR4P56555 118 aaPredicted RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 HSF1Q00613 529 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DMTNQ08495 405 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 GANABQ14697 944 aaKnown RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DHRS4L2Q6PKH6 230 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 ARSKQ6UWY0 536 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 TRILQ7L0X0 811 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 KRT73Q86Y46 540 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 CLIP4Q8N3C7 705 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 TOR1AIP2Q8NFQ8 470 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 TAMM41Q96BW9 452 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 SLC7A6OSQ96CW6 309 aaPredicted RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 EXOSC3Q9NQT5 275 aaKnown RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 RLIMQ9NVW2 624 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 TAS2R1Q9NYW7 299 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 ADA2Q9NZK5 511 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 CD300AQ9UGN4 299 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 DKKL1Q9UK85 242 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 IFT52Q9Y366 437 aa20.03■□□□□ 0.8
RAB40B-207ENST00000572603 MRPS18CQ9Y3D5 142 aaKnown RBP20.03■□□□□ 0.8
RAB40B-207ENST00000572603 POLEQ07864 2286 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 A0A1B0GVC2 190 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 GTPBP1O00178 669 aaKnown RBP20.02■□□□□ 0.8
RAB40B-207ENST00000572603 OPN1SWP03999 348 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 PRKAR1BP31321 381 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 B3GALT5-AS1P59052 145 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 FOXK1P85037 733 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 C19orf57Q0VDD7 668 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 BNIP1Q12981 228 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 SLC10A1Q14973 349 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 LARS2Q15031 903 aaKnown RBP20.02■□□□□ 0.8
RAB40B-207ENST00000572603 FXNQ16595 210 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 TMEM44Q2T9K0 475 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 PLPPR5Q32ZL2 321 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 ZNF311Q5JNZ3 666 aa20.02■□□□□ 0.8
RAB40B-207ENST00000572603 WIPI1Q5MNZ9 446 aaPredicted RBP20.02■□□□□ 0.8
RAB40B-207ENST00000572603 INTS11Q5TA45 600 aaKnown RBP20.02■□□□□ 0.8
RAB40B-207ENST00000572603 PATL1Q86TB9 770 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms