RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FAM98BQ52LJ0 330 aaKnown RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 UGT3A1Q6NUS8 523 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 IRGCQ6NXR0 463 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 UNC5DQ6UXZ4 953 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SYT10Q6XYQ8 523 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SH2D5Q6ZV89 423 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PRUNE1Q86TP1 453 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 ISCA2Q86U28 154 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TMEM135Q86UB9 458 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 AMIGO1Q86WK6 493 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PIANPQ8IYJ0 282 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TBC1D21Q8IYX1 336 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SLC22A15Q8IZD6 547 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 MNS1Q8NEH6 495 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SPATA4Q8NEY3 305 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 OR4E2Q8NGC2 313 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SKA2Q8WVK7 121 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PATE1Q8WXA2 126 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TFGQ92734 400 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 C9orf72Q96LT7 481 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SERPINB12Q96P63 405 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TGM7Q96PF1 710 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 KRT12Q99456 494 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 ABHD6Q9BV23 337 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 RAB11FIP5Q9BXF6 653 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TBC1D10AQ9BXI6 508 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 WWP1Q9H0M0 922 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 RAB17Q9H0T7 212 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TSPYL1Q9H0U9 437 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 KIR3DX1Q9H7L2 352 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 COG4Q9H9E3 785 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SYTL2Q9HCH5 934 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PDE7BQ9NP56 450 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PPANQ9NQ55 473 aaKnown RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 FBXO8Q9NRD0 319 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 C20orf96Q9NUD7 363 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 INTS10Q9NVR2 710 aaKnown RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 SLC39A1Q9NY26 324 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 EPHA6Q9UF33 1036 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SLC24A2Q9UI40 661 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 LNPEPQ9UIQ6 1025 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PYCARDQ9ULZ3 195 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 ASF1AQ9Y294 204 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 WDR37Q9Y2I8 494 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PCYT1BQ9Y5K3 369 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 FAM169AQ9Y6X4 670 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 CNOT1A5YKK6 2376 aaKnown RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 LRRK1Q38SD2 2015 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 MN1Q10571 1320 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 FRYQ5TBA9 3013 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PRSS51A0A1B0GVH4 220 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 GSAPA4D1B5 854 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR2A25A4D2G3 310 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR6C74A6NCV1 312 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 TLCD2A6NGC4 264 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR51F1A6NGY5 319 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 EFCAB7A8K855 629 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 C2orf74A8MZ97 194 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SLCO1B7G3V0H7 640 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 TTI1O43156 1089 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ZBTB14O43829 449 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SSX4O60224 188 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ZNF500O60304 480 aaPredicted RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR1I1O60431 355 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 VPS26AO75436 327 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 CREG1O75629 220 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SLCO2B1O94956 709 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 IGHV4-59P01825 116 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 C9P02748 559 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ACP2P11117 423 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 LIPCP11150 499 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 CDH3P22223 829 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ATP5DP30049 168 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 MAGEA3P43357 314 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SLC15A1P46059 708 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PDX1P52945 283 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ACY1Q03154 408 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 LGALS3BPQ08380 585 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 WHAMMP3Q1A5X7 153 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 TYSND1Q2T9J0 566 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SPANXN3Q5MJ09 141 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 RNASEH2BQ5TBB1 312 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 ANKRD22Q5VYY1 191 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ZNF470Q6ECI4 717 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 FAM92BQ6ZTR7 304 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 CENPUQ71F23 418 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 PRSS42Q7Z5A4 293 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ARHGAP22Q7Z5H3 698 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 ZNF554Q86TJ5 538 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 MARCH9Q86YJ5 346 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 NAT8LQ8N9F0 302 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 SIDT2Q8NBJ9 832 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 PAPD5Q8NDF8 572 aaKnown RBP3.54□□□□□ -1.84
NUP88-202ENST00000570937 OR5K2Q8NHB8 316 aa3.54□□□□□ -1.84
NUP88-202ENST00000570937 KIF18AQ8NI77 898 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms