RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ROBO4Q8WZ75 1007 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 L3HYPDHQ96EM0 354 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 RHNO1Q9BSD3 238 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TRAF4Q9BUZ4 470 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TRIM2Q9C040 744 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 UBQLN4Q9NRR5 601 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TMEM216Q9P0N5 145 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TBK1Q9UHD2 729 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 CDC42EP3Q9UKI2 254 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 POLR3HQ9Y535 204 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-204ENST00000570902 SCDO00767 359 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 PHF1O43189 567 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 PRKD3O94806 890 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 F12P00748 615 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 ADAP00813 363 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 FAM157CP0CG43 387 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 ELK4P28324 431 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 SFTPDP35247 375 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 ITGADQ13349 1161 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 SSX8Q7RTT4 187 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 ZNF551Q7Z340 670 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 NUFIP2Q7Z417 695 aaKnown RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 TUSC5Q8IXB3 177 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 B4GALNT2Q8NHY0 566 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 POC1BQ8TC44 478 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 UBLCP1Q8WVY7 318 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 SH3YL1Q96HL8 342 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 ANKZF1Q9H8Y5 726 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 MID1IP1Q9NPA3 183 aa16.87■□□□□ 0.29
SCARF1-204ENST00000570902 CISD1Q9NZ45 108 aaKnown RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 PSMC3IPQ9P2W1 217 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-204ENST00000570902 A0A1W2PQD3 144 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 ESPNB1AK53 854 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 GOLGA8RI6L899 631 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 PDPK1O15530 556 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 HSPA4LO95757 839 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 YES1P07947 543 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 PYGBP11216 843 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 SERPINB4P48594 390 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 PRKAG1P54619 331 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 NOXRED1Q6NXP6 359 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 BHLHA15Q7RTS1 189 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-204ENST00000570902 TRIM46Q7Z4K8 759 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 DTX2Q86UW9 622 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 ZFP28Q8NHY6 868 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 FAM110BQ8TC76 370 aa16.86■□□□□ 0.29
SCARF1-204ENST00000570902 GDF2Q9UK05 429 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-204ENST00000570902 DPRXA6NFQ7 191 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 H3BQF6 201 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 SSX4O60224 188 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 NDUFS7O75251 213 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 RSL1D1O76021 490 aaKnown RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 KCNK2O95069 426 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 CD8AP01732 235 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 SHBGP04278 402 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 LINGO3P0C6S8 592 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 MANFP55145 182 aaKnown RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 DSCR9P59020 149 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 C6orf52Q5T4I8 152 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 SEZ6L2Q6UXD5 910 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 Q6ZT83 130 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 FCRLAQ7L513 359 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 ATG4DQ86TL0 474 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 SLC43A2Q8N370 569 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 NUP43Q8NFH3 380 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 METTL2AQ96IZ6 378 aaKnown RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 ADAD1Q96M93 576 aaKnown RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 MS4A4EQ96PG1 132 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 SRXN1Q9BYN0 137 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 RRAGDQ9NQL2 400 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-204ENST00000570902 PRR14LQ5THK1 2151 aa16.85■□□□□ 0.29
SCARF1-204ENST00000570902 CRCPO75575 148 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 NTN1O95631 604 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 C8BP07358 591 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 PRIM2P49643 509 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 FOXA1P55317 472 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 FOXF1Q12946 379 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 PPA1Q15181 289 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 AGAP6Q5VW22 663 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 ZCCHC12Q6PEW1 402 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 SZRD1Q7Z422 152 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 MUCL1Q96DR8 90 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 ZNF764Q96H86 408 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-204ENST00000570902 RADILQ96JH8 1075 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 GSTO2Q9H4Y5 243 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 NTMQ9P121 344 aa16.84■□□□□ 0.29
SCARF1-204ENST00000570902 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 SLU7O95391 586 aaKnown RBP16.83■□□□□ 0.28
SCARF1-204ENST00000570902 ALOX5P09917 674 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 ACP2P11117 423 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 SHC1P29353 583 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 NUDT6P53370 316 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 CDH11P55287 796 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 NAA20P61599 178 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 STK11Q15831 433 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 DUSP5Q16690 384 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 CLEC2AQ6UVW9 174 aa16.83■□□□□ 0.28
SCARF1-204ENST00000570902 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms