RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 EDF1O60869 148 aaKnown RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 HEXAP06865 529 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ALOX5P09917 674 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 MAP3K8P41279 467 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ASMTP46597 345 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 RAC1P63000 192 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPG7-221ENST00000569720 BEX5Q5H9J7 111 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 CPTPQ5TA50 214 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ANKRD34AQ69YU3 496 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 GTF2IRD2BQ6EKJ0 949 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 R3HCC1LQ7Z5L2 792 aaKnown RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 GTF2IRD2Q86UP8 949 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 STK32CQ86UX6 486 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 GTPBP8Q8N3Z3 284 aaPredicted RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 COX18Q8N8Q8 333 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 OR10D3Q8NH80 312 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ACTRT2Q8TDY3 377 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 HOXB13Q92826 284 aaPredicted RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 MTERF3Q96E29 417 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 TSSK3Q96PN8 268 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 TNFRSF12AQ9NP84 129 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 PLSCR4Q9NRQ2 329 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 ACSS1Q9NUB1 689 aaPredicted RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 NTMQ9P121 344 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 RAI1Q7Z5J4 1906 aaPredicted RBP11.77□□□□□ -0.53
SPG7-221ENST00000569720 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 C7orf72A4D263 438 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 HDAC3O15379 428 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 KCNK2O95069 426 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 PABPC4LP0CB38 370 aaKnown RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPG7-221ENST00000569720 ACP2P11117 423 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 SDC1P18827 310 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 IL11P20809 199 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 LSP1P33241 339 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 FRKP42685 505 aaPredicted RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 PRIM2P49643 509 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 ZNF385BQ569K4 471 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 KANK2Q63ZY3 851 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 FIGNL1Q6PIW4 674 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 Q6ZSR9 355 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 ESPNLQ6ZVH7 1005 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 PLEKHM3Q6ZWE6 761 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 YTHDF3Q7Z739 585 aaKnown RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 GALNT10Q86SR1 603 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 GATSQ8NAP1 163 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 SLC16A11Q8NCK7 471 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 OR4C3Q8NH37 302 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 CLHC1Q8NHS4 586 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 FBXO30Q8TB52 745 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 FAM110BQ8TC76 370 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 JADE3Q92613 823 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 PERPQ96FX8 193 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 SH3YL1Q96HL8 342 aaPredicted RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 COX4I2Q96KJ9 171 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 FCRL1Q96LA6 429 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 Q96MF0 132 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 ZNF317Q96PQ6 595 aaPredicted RBP11.76□□□□□ -0.53
SPG7-221ENST00000569720 SORT1Q99523 831 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 UBQLN4Q9NRR5 601 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 CLEC4AQ9UMR7 237 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 PTGDR2Q9Y5Y4 395 aa11.76□□□□□ -0.53
SPG7-221ENST00000569720 ROS1P08922 2347 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 A0A1W2PQD3 144 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 A0A1W2PRB8 838 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 H7C1Q1 480 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 TNFSF11O14788 317 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 CXCL13O43927 109 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 LINC00032P0C843 101 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 MAPK1P28482 360 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 HPCAL1P37235 193 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 EIF1P41567 113 aaKnown RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 SLC6A8P48029 635 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 NR1H2P55055 460 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 POU6F2P78424 691 aaPredicted RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 PDE7AQ13946 482 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 DUSP5Q16690 384 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 RFTN2Q52LD8 501 aaPredicted RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 HBMQ6B0K9 141 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 MFSD12Q6NUT3 480 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 OR2T11Q8NH01 316 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 B4GALNT2Q8NHY0 566 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms