RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 BIKQ13323 160 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF141Q15928 474 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 PAQR6Q6TCH4 344 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 PLXDC1Q8IUK5 500 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF615Q8N8J6 731 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 BRIX1Q8TDN6 353 aaKnown RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 DACH2Q96NX9 599 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 RNF167Q9H6Y7 350 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 ERVMER34-1Q9H9K5 563 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.76■□□□□ 0.27
SMPD3-211ENST00000568373 SIT1Q9Y3P8 196 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 CSNK1G3Q9Y6M4 447 aa16.76■□□□□ 0.27
SMPD3-211ENST00000568373 MYO15AQ9UKN7 3530 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 A0A0B4J2E0 115 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 A0A1B0GX12 115 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 TMEM150CB9EJG8 249 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 HMGN1P05114 100 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 MYL12AP19105 171 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 ETV5P41161 510 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 SOX3P41225 446 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 ARL4DP49703 201 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 ETV1P50549 477 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 CFHR1Q03591 330 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMPD3-211ENST00000568373 NNATQ16517 81 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 TMEM44Q2T9K0 475 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 AMZ1Q400G9 498 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 AADACL4Q5VUY2 407 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 TTLL10Q6ZVT0 673 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 IGFN1Q86VF2 1251 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 LSRQ86X29 649 aaPredicted RBP16.75■□□□□ 0.27
SMPD3-211ENST00000568373 MCFD2Q8NI22 146 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 FANK1Q8TC84 345 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 RFKQ969G6 155 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 ARSGQ96EG1 525 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 UBQLN3Q9H347 655 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 LANCL2Q9NS86 450 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 B3GNT3Q9Y2A9 372 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 TMEM5Q9Y2B1 443 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 MED31Q9Y3C7 131 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 UNC13CQ8NB66 2214 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 SEC16AO15027 2179 aa16.75■□□□□ 0.27
SMPD3-211ENST00000568373 TTC36A6NLP5 189 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CHP2O43745 196 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 HYAL3O43820 417 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ADAM11O75078 769 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ZGLP1P0C6A0 271 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ENDOUP21128 410 aaKnown RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ACAA2P42765 397 aaKnown RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MLLT11Q13015 90 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 FGFBP1Q14512 234 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ZSWIM7Q19AV6 140 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF404Q494X3 552 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 HSDL2Q6YN16 418 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 TMPRSS11FQ6ZWK6 438 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 AMER2Q8N7J2 671 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 GRHL3Q8TE85 626 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 SLC35B4Q969S0 331 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MVB12AQ96EY5 273 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 HS6ST2Q96MM7 605 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MMP27Q9H306 513 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 OR52D1Q9H346 318 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ATP13A2Q9NQ11 1180 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 FLRT3Q9NZU0 649 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 GMEB2Q9UKD1 530 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CBLCQ9ULV8 474 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 OR10H1Q9Y4A9 318 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ARID1BQ8NFD5 2236 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 A0A1B0GWA3 101 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 METTL15A6NJ78 407 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 KPNA4O00629 521 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CLPSP04118 112 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 GIMD1P0DJR0 217 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 ATP12AP54707 1039 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 PSMD4P55036 377 aaKnown RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CDH11P55287 796 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CTBP2P56545 445 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 FXYD6P3P58550 94 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CDK20Q8IZL9 346 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MFSD4AQ8N468 514 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 BPIFA2Q96DR5 249 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 PTCHD1Q96NR3 888 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 TRIM2Q9C040 744 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CCDC59Q9P031 241 aaKnown RBP16.74■□□□□ 0.27
SMPD3-211ENST00000568373 PRODH2Q9UF12 536 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 CARD8Q9Y2G2 431 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MMACHCQ9Y4U1 282 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 A3GALT2U3KPV4 340 aa16.74■□□□□ 0.27
SMPD3-211ENST00000568373 MN1Q10571 1320 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-211ENST00000568373 C17orf105B2RV13 164 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 DSCR3O14972 297 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 APOL3O95236 402 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 BMP4P12644 408 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 FUT1P19526 365 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 ALAS2P22557 587 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 CSF2RBP32927 897 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 OR1D4P47884 311 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 GPLD1P80108 840 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms