RNA–Protein interactions for RNA: ENST00000566905.5

PKD1-232, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 559 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-232ENST00000566905 CALHM2Q9HA72 323 aa17.22■□□□□ 0.35
PKD1-232ENST00000566905 MED17Q9NVC6 651 aa17.22■□□□□ 0.35
PKD1-232ENST00000566905 CCDC167Q9P0B6 97 aa17.22■□□□□ 0.35
PKD1-232ENST00000566905 UNC79Q9P2D8 2635 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 CENPVL1A0A0U1RR11 272 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 PRAMEF27A3QJZ7 478 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 MBD3L4A6NDZ8 208 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 MBD3L3A6NE82 208 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 MBD3L5A6NJ08 208 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 H0YC42 278 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 LINC01387J3KSC0 135 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 HNRNPRO43390 633 aaKnown RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 UGT2B17O75795 530 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 UBL4AP11441 157 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 COX6B1P14854 86 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 NCF2P19878 526 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 BMP5P22003 454 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 CEACAM8P31997 349 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 MRPL19P49406 292 aaKnown RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 TPD52P55327 224 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 BCL2A1Q16548 175 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 PLPPR5Q32ZL2 321 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 TYW3Q6IPR3 259 aaKnown RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 SLC2A7Q6PXP3 512 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 HMGN2P46Q86SG4 172 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 FUNDC1Q8IVP5 155 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 MBD3L2Q8NHZ7 208 aaPredicted RBP17.21■□□□□ 0.35
PKD1-232ENST00000566905 RNF145Q96MT1 663 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 NPAS1Q99742 590 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 KCNE5Q9UJ90 142 aa17.21■□□□□ 0.35
PKD1-232ENST00000566905 A0A0G2JND7 137 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 SERINC4A6NH21 518 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ZNF264O43296 627 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 KIAA0513O60268 411 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 CYP7B1O75881 506 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 H6PDO95479 791 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ZNF17P17021 662 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 P2RX1P51575 399 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 CCR4P51679 360 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 AGFG1P52594 562 aaKnown RBP17.2■□□□□ 0.34
PKD1-232ENST00000566905 SUCLG1P53597 346 aaKnown RBP17.2■□□□□ 0.34
PKD1-232ENST00000566905 CLDN20P56880 219 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 CHRNEQ04844 493 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 SQLEQ14534 574 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ZNF141Q15928 474 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 SYPL1Q16563 259 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 TMEM44Q2T9K0 475 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 AGKQ53H12 422 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 BLOC1S3Q6QNY0 202 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 FRRS1Q6ZNA5 592 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 GRAMD2AQ8IUY3 354 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ZNF619Q8N2I2 560 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ANKFN1Q8N957 763 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 GTF2H4Q92759 462 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 ZBTB8AQ96BR9 441 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 SPDL1Q96EA4 605 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 AURKBQ96GD4 344 aaPredicted RBP17.2■□□□□ 0.34
PKD1-232ENST00000566905 TPT1P8Q9HAU6 139 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 POLE3Q9NRF9 147 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 AP4B1Q9Y6B7 739 aa17.2■□□□□ 0.34
PKD1-232ENST00000566905 DVL2O14641 736 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 OPN1LWP04000 364 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 ZCCHC18P0CG32 403 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 NR2F1P10589 423 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 CRATP43155 626 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 ATP4BP51164 291 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 ZNF136P52737 540 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 CLDN15P56746 228 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 EEFSECP57772 596 aaKnown RBP17.19■□□□□ 0.34
PKD1-232ENST00000566905 TXNL4AP83876 142 aaKnown RBP17.19■□□□□ 0.34
PKD1-232ENST00000566905 MAPK14Q16539 360 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 SLC25A35Q3KQZ1 300 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 P4HA3Q7Z4N8 544 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 ADGRE4PQ86SQ3 457 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 GTPBP8Q8N3Z3 284 aaPredicted RBP17.19■□□□□ 0.34
PKD1-232ENST00000566905 QRSL1Q9H0R6 528 aaKnown RBP17.19■□□□□ 0.34
PKD1-232ENST00000566905 TMEM185BQ9H7F4 350 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 MED4Q9NPJ6 270 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 CLCF1Q9UBD9 225 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 STOML1Q9UBI4 398 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 ICAM5Q9UMF0 924 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 LIPT1Q9Y234 373 aa17.19■□□□□ 0.34
PKD1-232ENST00000566905 CELSR2Q9HCU4 2923 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 NAV2Q8IVL1 2488 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 EIF4E2O60573 245 aaKnown RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 CSTAP01040 98 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 CHRM4P08173 479 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 LINGO3P0C6S8 592 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 UBTFL6P0CB48 400 aaPredicted RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 TMIGD3P0DMS9 266 aaPredicted RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 ETFAP13804 333 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 SUMO3P55854 103 aaPredicted RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 GUCY1A3Q02108 690 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 TFF3Q07654 80 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 SF3A3Q12874 501 aaKnown RBP eCLIP17.18■□□□□ 0.346e-9■■■■■ 32.1
PKD1-232ENST00000566905 FOXF1Q12946 379 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 MEX3BQ6ZN04 569 aaKnown RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 EIF3MQ7L2H7 374 aaKnown RBP17.18■□□□□ 0.34
PKD1-232ENST00000566905 GCNT2Q8N0V5 402 aa17.18■□□□□ 0.34
PKD1-232ENST00000566905 RELL2Q8NC24 303 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms