RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ACOT11Q8WXI4 607 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 KAT2AQ92830 837 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TSNAXQ99598 290 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 PORCNQ9H237 461 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SYT4Q9H2B2 425 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DPAGT1Q9H3H5 408 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PIGVQ9NUD9 493 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 LTBP3Q9NS15 1303 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 A0A1W2PPH5 198 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SULT1C2O00338 296 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FABP3P05413 133 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MMP3P08254 477 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TPI1P60174 286 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SUMO1P63165 101 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 HAGHQ16775 308 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CARD17Q5XLA6 110 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FIGLAQ6QHK4 219 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 IL27RAQ6UWB1 636 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 VSIG10LQ86VR7 867 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SKA3Q8IX90 412 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 BMPERQ8N8U9 685 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR5M9Q8NGP3 310 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR2T35Q8NGX2 323 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ACER1Q8TDN7 264 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HMGB4Q8WW32 186 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 NECAB3Q96P71 396 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 FEVQ99581 238 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TBL1YQ9BQ87 522 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RDH14Q9HBH5 336 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ASF1BQ9NVP2 202 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ICKQ9UPZ9 632 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 AAR2Q9Y312 384 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 PCDHB7Q9Y5E2 793 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM72CH0Y354 149 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FFAR3O14843 346 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GPR42O15529 346 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GSTZ1O43708 216 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 KERAO60938 352 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FBXO24O75426 580 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GADD45GO95257 159 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C22orf31O95567 290 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 IL5P05113 134 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SLC6A1P30531 599 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 CRATP43155 626 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ARF6P62330 175 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 KCNJ10P78508 379 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZNF234Q14588 700 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ST3GAL2Q16842 350 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM72AQ5TYM5 149 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GRHL2Q6ISB3 625 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM72DQ6L9T8 149 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM72BQ86X60 149 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PDZD9Q8IXQ8 264 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HORMAD2Q8N7B1 307 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OTUB2Q96DC9 234 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 NPY6RQ99463 290 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SAP130Q9H0E3 1048 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MS4A12Q9NXJ0 267 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SRPK3Q9UPE1 567 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DMRT1Q9Y5R6 373 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DLEC1Q9Y238 1755 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DSPPQ9NZW4 1301 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 COLCA2A8K830 154 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TLR4O00206 839 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TNFRSF10BO14763 440 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SLC31A2O15432 143 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 YPEL1O60688 119 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ALPIP09923 528 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CELP19835 753 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PTNP21246 168 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ACTR1BP42025 376 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MAT1AQ00266 395 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 MSANTD2Q6P1R3 559 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CFAP161Q6P656 301 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 WDR53Q7Z5U6 358 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 MARCH9Q86YJ5 346 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 SERPINA12Q8IW75 414 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM217AQ8IXS0 508 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PLA2G15Q8NCC3 412 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR56A4Q8NGH8 313 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SLC35F5Q8WV83 523 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HIST1H2ACQ93077 130 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C2orf88Q9BSF0 95 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TEX101Q9BY14 249 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 B3GNT5Q9BYG0 378 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ACKR4Q9NPB9 350 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RBM22Q9NW64 420 aaKnown RBP eCLIP2.74□□□□□ -1.974e-7■■■□□ 18.6
CHD9-218ENST00000566029 NTMQ9P121 344 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TCRBV16S1A1N1A0A5B0 115 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C2orf78A6NCI8 922 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GABRR3A8MPY1 467 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ANXA9O76027 345 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MT-ND4P03905 459 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 BCKDHAP12694 445 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GNSP15586 552 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MC3RP41968 323 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms