RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 LINC01555Q8NAE3 123 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SLC37A3Q8NCC5 494 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 OR2T27Q8NH04 317 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SPRYD4Q8WW59 207 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 ING5Q8WYH8 240 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 FGF11Q92914 225 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 NXPE3Q969Y0 559 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 CNRIP1Q96F85 164 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 RBM18Q96H35 190 aaKnown RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF681Q96N22 645 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SLC6A18Q96N87 628 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 APOOQ9BUR5 198 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 TMED9Q9BVK6 235 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SLC19A3Q9BZV2 496 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF350Q9GZX5 532 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 MIXL1Q9H2W2 232 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 OR52D1Q9H346 318 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 UBQLN3Q9H347 655 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 LRRN3Q9H3W5 708 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 EGLN3Q9H6Z9 239 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SEMA4GQ9NTN9 838 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 MCUBQ9NWR8 336 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 PAQR5Q9NXK6 330 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SIDT1Q9NXL6 827 aaKnown RBP7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SLC23A2Q9UGH3 650 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 PCOLCE2Q9UKZ9 415 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 SLC7A7Q9UM01 511 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 RNF215Q9Y6U7 377 aa7.11□□□□□ -1.27
ATXN3-249ENST00000564606 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 MTCL1Q9Y4B5 1905 aaKnown RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 LRRC72A6NJI9 287 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 WASHC1A8K0Z3 465 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 TNFRSF10AO00220 468 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 PHYHO14832 338 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 MID1O15344 667 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF749O43361 778 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 PLRG1O43660 514 aaKnown RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 PRICKLE3O43900 615 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 NOS1APO75052 506 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 DNAJB6O75190 326 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 RFPL3O75679 317 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 OR2B3O76000 313 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 NDUFB2O95178 105 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 TBX6O95947 436 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 C1QCP02747 245 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 RAB40ALP0C0E4 278 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 IFI30P13284 250 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ARSBP15848 533 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 EPCAMP16422 314 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 CERS1P27544 350 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 APEX1P27695 318 aaKnown RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 LCN1P31025 176 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 MMP15P51511 669 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ARPC4P59998 168 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 PRPS1P60891 318 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 FOXK2Q01167 660 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 C19orf57Q0VDD7 668 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 FOXD4Q12950 439 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 PON3Q15166 354 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 CLPPQ16740 277 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 COL28A1Q2UY09 1125 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 YIF1BQ5BJH7 314 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 FAM78AQ5JUQ0 283 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 CLEC12AQ5QGZ9 265 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 DCST2Q5T1A1 773 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 IDNKQ5T6J7 187 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 OR2G6Q5TZ20 316 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 AGBL4Q5VU57 503 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 SLC30A6Q6NXT4 461 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 NIPAL3Q6P499 406 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ULK3Q6PHR2 472 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 LRRN1Q6UXK5 716 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF793Q6ZN11 406 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 FRRS1Q6ZNA5 592 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 KIF18BQ86Y91 864 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 KLBQ86Z14 1044 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 CPOQ8IVL8 374 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 NLGN4XQ8N0W4 816 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 OR4D11Q8NGI4 311 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 OR51G2Q8NGK0 314 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 OR9A2Q8NGT5 310 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 RAB40AQ8WXH6 277 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 HERVK_113Q902F9 699 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ZNF707Q96C28 371 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-249ENST00000564606 BPIFA2Q96DR5 249 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 GIMAP5Q96F15 307 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 SLC35A4Q96G79 324 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 SAMD8Q96LT4 415 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
ATXN3-249ENST00000564606 WDR92Q96MX6 357 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms