RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 IGHV4-31P0DP07 118 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 G6PDP11413 515 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 CPMP14384 443 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 CSNK2A2P19784 350 aaPredicted RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 GALNSP34059 522 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 HPCAL1P37235 193 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 IDH3AP50213 366 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 FGFBP1Q14512 234 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 SQLEQ14534 574 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 FAM174BQ3ZCQ3 159 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 SLC30A6Q6NXT4 461 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 STAC2Q6ZMT1 411 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 UBQLNLQ8IYU4 475 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 WDSUB1Q8N9V3 476 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 CLHC1Q8NHS4 586 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 STON2Q8WXE9 905 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 EXOSC8Q96B26 276 aaKnown RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 ZNF764Q96H86 408 aaPredicted RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 NPHS2Q9NP85 383 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 FGFR1OP2Q9NVK5 253 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 TAS2R7Q9NYW3 318 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 AKAP10O43572 662 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 TCF21O43680 179 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 PRPS1L1P21108 318 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 TCEA1P23193 301 aaKnown RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 NUDT6P53370 316 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 CLDN8P56748 225 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 LSM12Q3MHD2 195 aaKnown RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 DESI1Q6ICB0 168 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 CLEC2AQ6UVW9 174 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 GFM2Q969S9 779 aaKnown RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 ADIPOR1Q96A54 375 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 PPCDCQ96CD2 204 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 ZMYND19Q96E35 227 aaPredicted RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 CHMP6Q96FZ7 201 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 OR52B2Q96RD2 323 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 PRPF18Q99633 342 aaKnown RBP14.23□□□□□ -0.13
RNF40-205ENST00000563909 OSBPL11Q9BXB4 747 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 ACTR6Q9GZN1 396 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 CXorf21Q9HAI6 301 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 TCF7L2Q9NQB0 619 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 SLC35C2Q9NQQ7 365 aa14.23□□□□□ -0.13
RNF40-205ENST00000563909 YLPM1P49750 1951 aaKnown RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 SLC35F4A4IF30 521 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ELOA3DA6NLF2 546 aaPredicted RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 UBDO15205 165 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 CD8AP01732 235 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 CD3EP07766 207 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 HNF1AP20823 631 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ABCD3P28288 659 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 FEN1P39748 380 aaKnown RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 GYS2P54840 703 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 DSCR9P59020 149 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 PDE7AQ13946 482 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 PTGR1Q14914 329 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 BCL2A1Q16548 175 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 GSTA3Q16772 222 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 PGGHGQ32M88 737 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ELOA3BQ3SY89 546 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 C6orf163Q5TEZ5 329 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 GALNT12Q8IXK2 581 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 NATD1Q8N6N6 113 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ZNF615Q8N8J6 731 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ELOA3Q8NG57 546 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 CNRIP1Q96F85 164 aaPredicted RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 THOC1Q96FV9 657 aaKnown RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 ZNF681Q96N22 645 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ZNF317Q96PQ6 595 aaPredicted RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 BBS4Q96RK4 519 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 EBF4Q9BQW3 602 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 TRAF4Q9BUZ4 470 aaPredicted RBP14.22□□□□□ -0.13
RNF40-205ENST00000563909 DPY30Q9C005 99 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 OR10A5Q9H207 317 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ALG2Q9H553 416 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 RNF122Q9H9V4 155 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 AIG1Q9NVV5 245 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 KLRF1Q9NZS2 232 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 SH3BP4Q9P0V3 963 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 ATP6V1HQ9UI12 483 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 DCTN4Q9UJW0 460 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 KCNS2Q9ULS6 477 aa14.22□□□□□ -0.13
RNF40-205ENST00000563909 A0A0G2JND7 137 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 SCAMP2O15127 329 aaKnown RBP14.21□□□□□ -0.13
RNF40-205ENST00000563909 ALDOCP09972 364 aaKnown RBP14.21□□□□□ -0.13
RNF40-205ENST00000563909 CT62P0C5K7 136 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 IDO1P14902 403 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 NT5EP21589 574 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 NTSP30990 170 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 MPIP34949 423 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 PTGDSP41222 190 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 CLNS1AP54105 237 aaKnown RBP14.21□□□□□ -0.13
RNF40-205ENST00000563909 C21orf58P58505 322 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 GNGT1P63211 74 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 IRX1P78414 480 aaPredicted RBP14.21□□□□□ -0.13
RNF40-205ENST00000563909 NRF1Q16656 503 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 ZNF672Q499Z4 452 aaPredicted RBP14.21□□□□□ -0.13
RNF40-205ENST00000563909 FAM166AQ6J272 317 aa14.21□□□□□ -0.13
RNF40-205ENST00000563909 RFLNBQ8N5W9 214 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms