RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SLC39A3Q9BRY0 314 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 SLC35A5Q9BS91 424 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 TRIM15Q9C019 465 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 SLC26A1Q9H2B4 701 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 MUC13Q9H3R2 512 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 KAT8Q9H7Z6 458 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 SERHLQ9NQF3 203 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 PNO1Q9NRX1 252 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 ZCCHC3Q9NUD5 404 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 EXD2Q9NVH0 621 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 VAPAQ9P0L0 249 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 ABCD2Q9UBJ2 740 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 CD300AQ9UGN4 299 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 NXT1Q9UKK6 140 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 SATB2Q9UPW6 733 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 CFL2Q9Y281 166 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 FARSAQ9Y285 508 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 PADI2Q9Y2J8 665 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 RRP15Q9Y3B9 282 aaKnown RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 TMEM184BQ9Y519 407 aaPredicted RBP4.28□□□□□ -1.72
CDR2-203ENST00000563573 CLCA3PQ9Y6N3 262 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
CDR2-203ENST00000563573 OTOGLQ3ZCN5 2332 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 IGLV3-12A0A075B6K2 115 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 A0A087WV62 115 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 TRBV5-3A0A0A0MS03 114 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 RNF103-CHMP3A0A140T963 221 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 VSTM2BA6NLU5 285 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 A8MUA0 341 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 C17orf105B2RV13 164 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 NME4O00746 187 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PLOD3O60568 738 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 COQ9O75208 318 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ALOX12BO75342 701 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 JRKO75564 520 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PDE5AO76074 875 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 STK17BO94768 372 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 IFNA14P01570 189 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CD1AP06126 327 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CHRM2P08172 466 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ALOX5P09917 674 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 RAB40ALP0C0E4 278 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 UMPSP11172 480 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 MAOAP21397 527 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CD82P27701 267 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 HTR1EP28566 365 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SLC5A2P31639 672 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 RORAP35398 523 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ETV5P41161 510 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 GSK3BP49841 420 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 KHKP50053 298 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CDK9P50750 372 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 ZNF81P51508 661 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PGDP52209 483 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PDX1P52945 283 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 OR4D2P58180 307 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PROK1P58294 105 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 MTPNP58546 118 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 DSTNP60981 165 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 KCNJ2P63252 427 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 IGLV3-21P80748 117 aaPredicted RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 ID2Q02363 134 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 VEZF1Q14119 521 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ZNF267Q14586 743 aaPredicted RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 RGNQ15493 299 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CYP51A1Q16850 503 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PRICKLE4Q2TBC4 344 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ZNF750Q32MQ0 723 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 GLIPR1L2Q4G1C9 344 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PIGGQ5H8A4 983 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 MTX3Q5HYI7 312 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PLAC9Q5JTB6 97 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ATAD3BQ5T9A4 648 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 INTS11Q5TA45 600 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 FAM199XQ6PEV8 388 aaPredicted RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 C1QL2Q7Z5L3 287 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CPEB2Q7Z5Q1 589 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 DHFR2Q86XF0 187 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PRSS58Q8IYP2 241 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ESX1Q8N693 406 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 CDRT4Q8N9R6 151 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SLC38A9Q8NBW4 561 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 C11orf65Q8NCR3 313 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 MORN4Q8NDC4 146 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 OR7G1Q8NGA0 311 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 OR9A2Q8NGT5 310 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 OR5AK3PQ8NH89 298 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 OR14A16Q8NHC5 309 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SUN3Q8TAQ9 357 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 PNPT1Q8TCS8 783 aaKnown RBP4.27□□□□□ -1.73
CDR2-203ENST00000563573 ZNF675Q8TD23 568 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SLC26A7Q8TE54 656 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 XAGE5Q8WWM1 108 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 KAT2AQ92830 837 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 STMN2Q93045 179 aa4.27□□□□□ -1.73
CDR2-203ENST00000563573 ASB9Q96DX5 294 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms