RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 MAN2C1Q9NTJ4 1040 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 CNOT11Q9UKZ1 510 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 MSRB2Q9Y3D2 182 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 ZNF264O43296 627 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 NDUFB5O43674 189 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SCO2O43819 266 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 CYP7B1O75881 506 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 RASAL1O95294 804 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 H1F0P07305 194 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 UBL4AP11441 157 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 PRKACGP22612 351 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SSR4P51571 173 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TAS2R41P59536 307 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 FOXD4Q12950 439 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 AIMP2Q13155 320 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 SKP2Q13309 424 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 OR1Q1Q15612 314 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 JMJD6Q6NYC1 403 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 OPN5Q6U736 354 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 CBLN3Q6UW01 205 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 IL20RBQ6UXL0 311 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 ZNF550Q7Z398 422 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 STK32CQ86UX6 486 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 RANBP3LQ86VV4 465 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 ZDHHC13Q8IUH4 622 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SLC5A8Q8N695 610 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 OR10G3Q8NGC4 313 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 ADAMTS16Q8TE57 1224 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 ASB15Q8WXK1 588 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TTC9Q92623 222 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 FGF11Q92914 225 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 FER1L6-AS2Q96M78 137 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 FUZQ9BT04 418 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TBL1XR1Q9BZK7 514 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 PDP1Q9P0J1 537 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 CARD8Q9Y2G2 431 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 AKAP13Q12802 2813 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 TRBV4-1A0A0J9YWV2 114 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 ARGFXA6NJG6 315 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 GTPBP1O00178 669 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 EI24O14681 340 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 ANGPTL1O95841 491 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 ELAVL4P26378 380 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 PTGDSP41222 190 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 GAS1P54826 345 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 AQP4P55087 323 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 ZNF117Q03924 483 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 EPS8Q12929 822 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 COLEC12Q5KU26 742 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 ZNF468Q5VIY5 522 aaPredicted RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 BICRALQ6AI39 1079 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 IZUMO2Q6UXV1 221 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 PLEKHM3Q6ZWE6 761 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 GDF7Q7Z4P5 450 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 LSRQ86X29 649 aaPredicted RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 HIPK1Q86Z02 1210 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 OFCC1Q8IZS5 231 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 NR4A3Q92570 626 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 NRBF2Q96F24 287 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 ALPK1Q96QP1 1244 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 MYCBPQ99417 103 aaPredicted RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 KLHDC3Q9BQ90 382 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 FNDC11Q9BVV2 318 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 POLR2J2Q9GZM3 115 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 LAT2Q9GZY6 243 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 GABARAPL1Q9H0R8 117 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 POLR2J3Q9H1A7 115 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 SMURF2Q9HAU4 748 aa9.3□□□□□ -0.92
SMG1-208ENST00000563448 EXOSC3Q9NQT5 275 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 CHCHD2Q9Y6H1 151 aaPredicted RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 TNRC6AQ8NDV7 1962 aaKnown RBP9.3□□□□□ -0.92
SMG1-208ENST00000563448 C7orf72A4D263 438 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 H3BNH8 94 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 FMO6PO60774 539 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 OR5F1O95221 314 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 PRKAR1AP10644 381 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ITGA3P26006 1051 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ARHGDIAP52565 204 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SEC23BQ15437 767 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 MEP1AQ16819 746 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ACER2Q5QJU3 275 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 PACRGLQ8N7B6 248 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 MAGEE2Q8TD90 523 aaPredicted RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 KCNE4Q8WWG9 221 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 THAP4Q8WY91 577 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SLC41A3Q96GZ6 507 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ZNF559Q9BR84 538 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 OSBPL10Q9BXB5 764 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 LHPPQ9H008 270 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 A0A1W2PRQ8 180 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 B4DXG7 233 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DLGAP1O14490 977 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 TP53I11O14683 189 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 EFSO43281 561 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms