RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 LDLRAD3Q86YD5 345 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 TSNAXQ99598 290 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 RIOK2Q9BVS4 552 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 WDR26Q9H7D7 661 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 EPHA6Q9UF33 1036 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 IGF2P01344 180 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 EPORP19235 508 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 MST1P26927 711 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 DHCR24Q15392 516 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 MICBQ29980 383 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 HES5Q5TA89 166 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 HBMQ6B0K9 141 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 LRRN1Q6UXK5 716 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 OR10K1Q8NGX5 313 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 OR10A4Q9H209 315 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 CBLCQ9ULV8 474 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 RPH3AQ9Y2J0 694 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 KPNA3O00505 521 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 SEMA7AO75326 666 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 LIM2P55344 173 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF124Q15973 351 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 SGCAQ16586 387 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 METTL11BQ5VVY1 283 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 TMEM17Q86X19 198 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 CACUL1Q86Y37 369 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 OXR1Q8N573 874 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 POLDIP3Q9BY77 421 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 MED11Q9P086 117 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 RFXAPO00287 272 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 ACP2P11117 423 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 ATP1B2P14415 290 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 TIMP2P16035 220 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 CBR1P16152 277 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 SLC6A11P48066 632 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 FNTBP49356 437 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 RAP2BP61225 183 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 E2F1Q01094 437 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 MRPL15Q9P015 296 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 PPIL1Q9Y3C6 166 aa13.09□□□□□ -0.31
GTF3C1-203ENST00000562609 FXYD6-FXYD2A0A087WZ82 144 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 OR6C68A6NDL8 312 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 EFCAB7A8K855 629 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 SCAMP1O15126 338 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 POP7O75817 140 aaKnown RBP13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 CRYBA1P05813 215 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 DGKGP49619 791 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 SNRPEP62304 92 aaKnown RBP13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 RAB40BQ12829 278 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 GINS1Q14691 196 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 CPTPQ5TA50 214 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 LYPLAL1Q5VWZ2 237 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 CMIPQ8IY22 773 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 FUZQ9BT04 418 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 FXYD6Q9H0Q3 95 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 OR51M1Q9H341 326 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 FN3KQ9H479 309 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 ANKRD19PQ9H560 264 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 GAREM1Q9H706 876 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 FGF20Q9NP95 211 aaPredicted RBP13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 C14orf105Q9NVL8 296 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF69Q9UC07 566 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 SLC22A14Q9Y267 594 aa13.08□□□□□ -0.31
GTF3C1-203ENST00000562609 DENND4AQ7Z401 1863 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SULT1C2O00338 296 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SH3BGRLO75368 114 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SERPINA3P01011 423 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 CA3P07451 260 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms