RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNF264O43296 627 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 BCAS1O75363 584 aaPredicted RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 GCM2O75603 506 aaPredicted RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 KRT34O76011 436 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 PGM3O95394 542 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 ACTL6AO96019 429 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 BCHEP06276 602 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 NR2F1P10589 423 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 UBL4AP11441 157 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 DPP4P27487 766 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 P2RX1P51575 399 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 MTPNP58546 118 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 EEF1A1P68104 462 aaKnown RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 HPCAP84074 193 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 RBPJQ06330 500 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 CAPRIN1Q14444 709 aaKnown RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 KRT72Q14CN4 511 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 GPAT3Q53EU6 434 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 EIPR1Q53HC9 387 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 OR5M10Q6IEU7 315 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 ADGRE4PQ86SQ3 457 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 GTPBP8Q8N3Z3 284 aaPredicted RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 POU5F2Q8N7G0 328 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 OR4K17Q8NGC6 315 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 B4GALNT2Q8NHY0 566 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 MAL2Q969L2 176 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 RCN3Q96D15 328 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 TRIM8Q9BZR9 551 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 QRSL1Q9H0R6 528 aaKnown RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 GID8Q9NWU2 228 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 MED11Q9P086 117 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 ABCD2Q9UBJ2 740 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 GPC6Q9Y625 555 aaPredicted RBP12.17□□□□□ -0.46
CDH1-204ENST00000562118 KIAA1549Q9HCM3 1950 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 C15orf38-AP3S2A0A0A6YYH1 394 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 CDHR4A6H8M9 788 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 H3BNH8 94 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ADAM11O75078 769 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 DBIP07108 87 aaKnown RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 CPN1P15169 458 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 HPGDP15428 266 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ADH6P28332 368 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 PCGF2P35227 344 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 PTGS2P35354 604 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 LHX2P50458 406 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 KCNJ10P78508 379 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 CDK6Q00534 326 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 BCL2A1Q16548 175 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ZSWIM7Q19AV6 140 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 RABL3Q5HYI8 236 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 DCST1Q5T197 706 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 REEP3Q6NUK4 255 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 EIF3MQ7L2H7 374 aaKnown RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 ARPINQ7Z6K5 226 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 DOLPP1Q86YN1 238 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ZZZ3Q8IYH5 903 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 FITM2Q8N6M3 262 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 OR5W2Q8NH69 310 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 POC1BQ8TC44 478 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 GPR119Q8TDV5 335 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ZBTB8AQ96BR9 441 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 SARAFQ96BY9 339 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 UCN2Q96RP3 112 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 DMRTA2Q96SC8 542 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 HOPXQ9BPY8 73 aaPredicted RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 UGT2B28Q9BY64 529 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 MED17Q9NVC6 651 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
CDH1-204ENST00000562118 TAS2R10Q9NYW0 307 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 AP3M1Q9Y2T2 418 aa12.16□□□□□ -0.46
CDH1-204ENST00000562118 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH1-204ENST00000562118 PABPC4LP0CB38 370 aaKnown RBP12.15□□□□□ -0.46
CDH1-204ENST00000562118 ZNF708P17019 499 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 BMP7P18075 431 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 PRKAR1BP31321 381 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 CRYBA2P53672 197 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 CLDN18P56856 261 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 C3AR1Q16581 482 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 FXNQ16595 210 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 MMEL1Q495T6 779 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 RPS26P11Q5JNZ5 115 aaPredicted RBP12.15□□□□□ -0.46
CDH1-204ENST00000562118 DHRS4L2Q6PKH6 230 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 ARSKQ6UWY0 536 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 CCDC80Q76M96 950 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 YRDCQ86U90 279 aaKnown RBP12.15□□□□□ -0.46
CDH1-204ENST00000562118 IFNEQ86WN2 208 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms