RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 ZFR2Q9UPR6 939 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 ICKQ9UPZ9 632 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MRPS7Q9Y2R9 242 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MAP4K5Q9Y4K4 846 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 GABRPO00591 440 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 PDCD5O14737 125 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SIGLEC6O43699 453 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SULT1B1O43704 296 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SELENOFO60613 162 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 BSGP35613 385 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 FEN1P39748 380 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 GAS1P54826 345 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SMIM11AP58511 58 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SHC2P98077 582 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 CDK6Q00534 326 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 PABPC1L2AQ5JQF8 200 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 NLRC3Q7RTR2 1065 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 ST8SIA2Q92186 375 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MYADMQ96S97 322 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 POLR2J3Q9H1A7 115 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 H7BY64 318 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 PRODHO43272 600 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 LANCL1O43813 399 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 NPR2P20594 1047 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 GDI1P31150 447 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 SOAT1P35610 550 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 ITPRIPL2Q3MIP1 535 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 DCST1Q5T197 706 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 CD300LDQ6UXZ3 194 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 NUDT18Q6ZVK8 323 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 SLITRK4Q8IW52 837 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 OR8K3Q8NH51 312 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 RPLP0P6Q8NHW5 317 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 GATAD2BQ8WXI9 593 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 HSD17B8Q92506 261 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 KLK6Q92876 244 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 TM4SF18Q96CE8 201 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 CXorf58Q96LI9 332 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 SPATA5L1Q9BVQ7 753 aa13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 SPRTNQ9H040 489 aaPredicted RBP13.02□□□□□ -0.32
RABGGTA-220ENST00000560998 LOC105369274A0A096LPK9 316 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 FEZF1A0PJY2 475 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 L7N2F9 121 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 RTCAO00442 366 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 YKT6O15498 198 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 EEF1E1O43324 174 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TLX2O43763 284 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TBX19O60806 448 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SOX14O95416 240 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PAK4O96013 591 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 HRGP04196 525 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ADRB1P08588 477 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ARAFP10398 606 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ACP5P13686 325 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 UQCRC2P22695 453 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CD96P40200 585 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SHHQ15465 462 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 OR2G6Q5TZ20 316 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC22A10Q63ZE4 541 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 KANSL1Q7Z3B3 1105 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 OR4N4Q8N0Y3 316 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TOMM5Q8N4H5 51 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LINC01555Q8NAE3 123 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF485Q8NCK3 441 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 MOSPD2Q8NHP6 518 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 INSM2Q96T92 566 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PHPT1Q9NRX4 125 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TVP23BQ9NYZ1 205 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SPATA2Q9UM82 520 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 HEATR5BQ9P2D3 2071 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LINC01565O15544 149 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TFPIP10646 304 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ZP1P60852 638 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 FGL1Q08830 312 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 GPR68Q15743 365 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 MLF2Q15773 248 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC36A2Q495M3 483 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CYP27C1Q4G0S4 372 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 TCTE1Q5JU00 501 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF776Q68DI1 518 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms