RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IGHV4-31P0DP07 118 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 HMOX2P30519 316 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 PHBP35232 272 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 OR3A2P47893 321 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 GPR151Q8TDV0 419 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 FAM168AQ92567 244 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 PIK3R3Q92569 461 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 DHRS9Q9BPW9 319 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 RAB17Q9H0T7 212 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 ACSS3Q9H6R3 686 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 TMEM185BQ9H7F4 350 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 MIEF1Q9NQG6 463 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 UBQLN4Q9NRR5 601 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 A0A1W2PQD3 144 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 CCDC151A5D8V7 595 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 H7C417 338 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 UBFD1O14562 309 aaKnown RBP16.4■□□□□ 0.22
TPM1-226ENST00000560959 ABCD4O14678 606 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 PRPS2P11908 318 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 GZMKP49863 264 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 GPRIN3Q6ZVF9 776 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 CDRT4Q8N9R6 151 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 OR6Y1Q8NGX8 325 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 CEP70Q8NHQ1 597 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 FAM76AQ8TAV0 307 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 C10orf105Q8TEF2 133 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 EBPLQ9BY08 206 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 SRXN1Q9BYN0 137 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 KLHL9Q9P2J3 617 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
TPM1-226ENST00000560959 YLPM1P49750 1951 aaKnown RBP16.39■□□□□ 0.21
TPM1-226ENST00000560959 KIF2AO00139 706 aaPredicted RBP16.39■□□□□ 0.21
TPM1-226ENST00000560959 RGS14O43566 566 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 SUPT7LO94864 414 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 ENO1P06733 434 aaKnown RBP16.39■□□□□ 0.21
TPM1-226ENST00000560959 USF1P22415 310 aaPredicted RBP16.39■□□□□ 0.21
TPM1-226ENST00000560959 SFTPDP35247 375 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 SERPINB9P50453 376 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
TPM1-226ENST00000560959 UNC50Q53HI1 259 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 ARL13AQ5H913 290 aaPredicted RBP16.39■□□□□ 0.21
TPM1-226ENST00000560959 ZNF678Q5SXM1 525 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 LIPNQ5VXI9 398 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 TMEM108Q6UXF1 575 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 B4GALNT2Q8NHY0 566 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 MYNNQ9NPC7 610 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 NTMQ9P121 344 aa16.39■□□□□ 0.21
TPM1-226ENST00000560959 E7EQL1 145 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 ZNF195O14628 629 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 EFNA2O43921 213 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 LYZL6O75951 148 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 HSPA4LO95757 839 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 PGRP06401 933 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 BMP4P12644 408 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 HPGDP15428 266 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 GGT1P19440 569 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 COX5AP20674 150 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 PTAFRP25105 342 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 SHC1P29353 583 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 PKNOX1P55347 436 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 RAC3P60763 192 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 TRADDQ15628 312 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 STK11Q15831 433 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 IKBIPQ70UQ0 350 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 MTERF4Q7Z6M4 381 aaKnown RBP16.38■□□□□ 0.21
TPM1-226ENST00000560959 FBXL14Q8N1E6 418 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 MUC15Q8N387 334 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 ZNF525Q8N782 197 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 IQCGQ9H095 443 aaKnown RBP16.38■□□□□ 0.21
TPM1-226ENST00000560959 NPAP1Q9NZP6 1156 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 ING1Q9UK53 422 aaPredicted RBP16.38■□□□□ 0.21
TPM1-226ENST00000560959 KCNS2Q9ULS6 477 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 ACTL7BQ9Y614 415 aa16.38■□□□□ 0.21
TPM1-226ENST00000560959 OR5H1A6NKK0 313 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 SCDO00767 359 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 KCNK2O95069 426 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 INHBAP08476 426 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 TAC1P20366 129 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 IGFBP5P24593 272 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 SERPINB4P48594 390 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 HTR6P50406 440 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 EFNA4P52798 201 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 BTKQ06187 659 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 SQLEQ14534 574 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 TMEM176BQ3YBM2 270 aaPredicted RBP16.37■□□□□ 0.21
TPM1-226ENST00000560959 FAM166AQ6J272 317 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 ZNF544Q6NX49 715 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 ZCCHC12Q6PEW1 402 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 ARIH2OSQ8N7S6 290 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 GATSQ8NAP1 163 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 SH3YL1Q96HL8 342 aaPredicted RBP16.37■□□□□ 0.21
TPM1-226ENST00000560959 PSD2Q9BQI7 771 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 GPC6Q9Y625 555 aaPredicted RBP16.37■□□□□ 0.21
TPM1-226ENST00000560959 FREM1Q5H8C1 2179 aa16.37■□□□□ 0.21
TPM1-226ENST00000560959 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 ZNF724A8MTY0 619 aa16.36■□□□□ 0.21
TPM1-226ENST00000560959 DHRS4L1P0CG22 281 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms