RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SLC25A30Q5SVS4 291 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ANKRD37Q7Z713 158 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF440Q8IYI8 595 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF527Q8NB42 609 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 TMEM239Q8WW34 195 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 EFHD2Q96C19 240 aaPredicted RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 MPP4Q96JB8 637 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 HS6ST2Q96MM7 605 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 RHNO1Q9BSD3 238 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 POLDIP3Q9BY77 421 aaKnown RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 SEMA4CQ9C0C4 833 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 WWTR1Q9GZV5 400 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 C11orf16Q9NQ32 467 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 IL20Q9NYY1 176 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 FLRT3Q9NZU0 649 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 A0A1B0GWA3 101 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 M0R129 80 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 MEN1O00255 615 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 ALOX12BO75342 701 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 CSTAP01040 98 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 MT-ND2P03891 347 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 HEXBP07686 556 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 DCKP27707 260 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 GSTT1P30711 240 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 SMSP52788 366 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 MC2RQ01718 297 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
SNX1-211ENST00000560829 SLC29A4Q7RTT9 530 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 NFAM1Q8NET5 270 aaPredicted RBP11.88□□□□□ -0.51
SNX1-211ENST00000560829 FAR1Q8WVX9 515 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 GGHQ92820 318 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 FGF11Q92914 225 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 HSPBAP1Q96EW2 488 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 Q96MT0 163 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 SPSB2Q99619 263 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 DOK1Q99704 481 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 COPS4Q9BT78 406 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 PLA2G12AQ9BZM1 189 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 CCDC90BQ9GZT6 254 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 EXOSC3Q9NQT5 275 aaKnown RBP11.88□□□□□ -0.51
SNX1-211ENST00000560829 FBXO8Q9NRD0 319 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 CLN6Q9NWW5 311 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 PTTG2Q9NZH5 202 aa11.88□□□□□ -0.51
SNX1-211ENST00000560829 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
SNX1-211ENST00000560829 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SAGE2PA6NJ88 616 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 PIP5K1CO60331 668 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 TBXA2RP21731 343 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ACVR2AP27037 513 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CCKBRP32239 447 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 RBM34P42696 430 aaKnown RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 MASP1P48740 699 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 PCYT1AP49585 367 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CTBP2P56545 445 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 PRKCDQ05655 676 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 OCLNQ16625 522 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 HLA-DQA1Q5Y7H0 255 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SLC27A4Q6P1M0 643 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 LINC00114Q6XXX2 140 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SHISA6Q6ZSJ9 500 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 AHSA2Q719I0 299 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SLCO6A1Q86UG4 719 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 FAM26EQ8N5C1 309 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 OR8D4Q8NGM9 314 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 TEX47Q8TBZ9 253 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 RHBDD1Q8TEB9 315 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 MYDGFQ969H8 173 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 GAL3ST4Q96RP7 486 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 TSC22D3Q99576 134 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 LHPPQ9H008 270 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 DSN1Q9H410 356 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 EGLN3Q9H6Z9 239 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 TMEM5Q9Y2B1 443 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CCDC88CQ9P219 2028 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 EFCAB10A6NFE3 127 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 PRKNO60260 465 aaPredicted RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 TSPAN2O60636 221 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 UTS2O95399 124 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CDK1P06493 297 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 NGFRP08138 427 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 PIPP12273 146 aaPredicted RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 SLC15A1P46059 708 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 GPR4P46093 362 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 EMP2P54851 167 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ACSM5Q6NUN0 579 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ULK3Q6PHR2 472 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 TMPRSS11FQ6ZWK6 438 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 OSTF1Q92882 214 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms