RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 WFDC11Q8NEX6 87 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ATP6V1C2Q8NEY4 427 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 OR2V1Q8NHB1 315 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ROBO4Q8WZ75 1007 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ZBTB8AQ96BR9 441 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ADGRG7Q96K78 797 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 STACQ99469 402 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 HHATLQ9HCP6 504 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 NEUROD4Q9HD90 331 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 PLSCR4Q9NRQ2 329 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 DUSP22Q9NRW4 184 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ZNF226Q9NYT6 803 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 MCTS1Q9ULC4 181 aaKnown RBP9.16□□□□□ -0.94
LDLR-214ENST00000560628 CARD8Q9Y2G2 431 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 EMC9Q9Y3B6 208 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
LDLR-214ENST00000560628 NUP214P35658 2090 aaPredicted RBP9.16□□□□□ -0.94
LDLR-214ENST00000560628 A0A1W2PQD3 144 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 C7orf72A4D263 438 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ZNF195O14628 629 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ADAMDEC1O15204 470 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 EFNA2O43921 213 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 LINGO3P0C6S8 592 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 CRYGSP22914 178 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ME2P23368 584 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 SOAT1P35610 550 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 PCYT1AP49585 367 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 CASP9P55211 416 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
LDLR-214ENST00000560628 HBA1P69905 142 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 OCRLQ01968 901 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ZNF117Q03924 483 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 EMX2Q04743 252 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 FOXF1Q12946 379 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 FGFBP1Q14512 234 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 CHI3L2Q15782 390 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 TOMM34Q15785 309 aaPredicted RBP9.15□□□□□ -0.94
LDLR-214ENST00000560628 PDCD2Q16342 344 aaPredicted RBP9.15□□□□□ -0.94
LDLR-214ENST00000560628 KRT71Q3SY84 523 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 DCST2Q5T1A1 773 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
LDLR-214ENST00000560628 OR4F3Q6IEY1 312 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ESPNLQ6ZVH7 1005 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 OLIG3Q7RTU3 272 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 CLECL1Q8IZS7 167 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 NATD1Q8N6N6 113 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ZNF614Q8N883 585 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 OR56A1Q8NGH5 318 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 OR5D16Q8NGK9 328 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 RFWD2Q8NHY2 731 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 FBXO27Q8NI29 283 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 PSMA8Q8TAA3 256 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 CAVIN3Q969G5 261 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 ZNF524Q96C55 264 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 GMPPAQ96IJ6 420 aaPredicted RBP9.15□□□□□ -0.94
LDLR-214ENST00000560628 HS3ST6Q96QI5 342 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 OR7D2Q96RA2 312 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 DUSP26Q9BV47 211 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 TMEM109Q9BVC6 243 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 BHLHE41Q9C0J9 482 aaPredicted RBP9.15□□□□□ -0.94
LDLR-214ENST00000560628 HOXD1Q9GZZ0 328 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 C12orf49Q9H741 205 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 UBTD1Q9HAC8 227 aa9.15□□□□□ -0.94
LDLR-214ENST00000560628 H3BNH8 94 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 RGS16O15492 202 aaPredicted RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 SS18L1O75177 396 aaPredicted RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 NTN1O95631 604 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 SERPINE1P05121 402 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 THBDP07204 575 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 KRT16P08779 473 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 MATN1P21941 496 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 HOXC12P31275 282 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 EIF1P41567 113 aaKnown RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 P2RX1P51575 399 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 ATP12AP54707 1039 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 CLDN8P56748 225 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 ABCE1P61221 599 aaKnown RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 NKX6-1P78426 367 aaPredicted RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 ZNF844Q08AG5 666 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 TMEM176BQ3YBM2 270 aaPredicted RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 PDSS1Q5T2R2 415 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 WDR93Q6P2C0 686 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 STAC2Q6ZMT1 411 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 C6orf120Q7Z4R8 191 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 CXorf67Q86X51 503 aaPredicted RBP9.14□□□□□ -0.95
LDLR-214ENST00000560628 ZNF781Q8N8C0 355 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 ZNF527Q8NB42 609 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 OR6K3Q8NGY3 331 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 SFXN5Q8TD22 340 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 GPR119Q8TDV5 335 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 ARSGQ96EG1 525 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 KLHL15Q96M94 604 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 SDF2Q99470 211 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 SMR3AQ99954 134 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 PARD6BQ9BYG5 372 aa9.14□□□□□ -0.95
LDLR-214ENST00000560628 C20orf27Q9GZN8 174 aa9.14□□□□□ -0.95
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